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Page 1
Proteogenomics of Adenosine-to-Inosine RNA Editing in the Fruit Fly.
Kuznetsova KG, Kliuchnikova AA, Ilina IU, Chernobrovkin AL, Novikova SE, Farafonova TE, Karpov DS, Ivanov MV, Goncharov AO, Ilgisonis EV, Voronko OE, Nasaev SS, Zgoda VG, Zubarev RA, Gorshkov MV, Moshkovskii SA. Kuznetsova KG, et al. Among authors: kliuchnikova aa. J Proteome Res. 2018 Nov 2;17(11):3889-3903. doi: 10.1021/acs.jproteome.8b00553. Epub 2018 Oct 17. J Proteome Res. 2018. PMID: 30298734
Validating Amino Acid Variants in Proteogenomics Using Sequence Coverage by Multiple Reads.
Levitsky LI, Kuznetsova KG, Kliuchnikova AA, Ilina IY, Goncharov AO, Lobas AA, Ivanov MV, Lazarev VN, Ziganshin RH, Gorshkov MV, Moshkovskii SA. Levitsky LI, et al. Among authors: kliuchnikova aa. J Proteome Res. 2022 Jun 3;21(6):1438-1448. doi: 10.1021/acs.jproteome.2c00033. Epub 2022 May 10. J Proteome Res. 2022. PMID: 35536917
Proteome-Wide Analysis of ADAR-Mediated Messenger RNA Editing during Fruit Fly Ontogeny.
Kliuchnikova AA, Goncharov AO, Levitsky LI, Pyatnitskiy MA, Novikova SE, Kuznetsova KG, Ivanov MV, Ilina IY, Farafonova TE, Zgoda VG, Gorshkov MV, Moshkovskii SA. Kliuchnikova AA, et al. J Proteome Res. 2020 Oct 2;19(10):4046-4060. doi: 10.1021/acs.jproteome.0c00347. Epub 2020 Sep 11. J Proteome Res. 2020. PMID: 32866021
Adenosine-to-Inosine RNA Editing in Mouse and Human Brain Proteomes.
Levitsky LI, Kliuchnikova AA, Kuznetsova KG, Karpov DS, Ivanov MV, Pyatnitskiy MA, Kalinina OV, Gorshkov MV, Moshkovskii SA. Levitsky LI, et al. Among authors: kliuchnikova aa. Proteomics. 2019 Dec;19(23):e1900195. doi: 10.1002/pmic.201900195. Epub 2019 Nov 13. Proteomics. 2019. PMID: 31576663
Multiomic Profiling Identified EGF Receptor Signaling as a Potential Inhibitor of Type I Interferon Response in Models of Oncolytic Therapy by Vesicular Stomatitis Virus.
Nikitina AS, Lipatova AV, Goncharov AO, Kliuchnikova AA, Pyatnitskiy MA, Kuznetsova KG, Hamad A, Vorobyev PO, Alekseeva ON, Mahmoud M, Shakiba Y, Anufrieva KS, Arapidi GP, Ivanov MV, Tarasova IA, Gorshkov MV, Chumakov PM, Moshkovskii SA. Nikitina AS, et al. Among authors: kliuchnikova aa. Int J Mol Sci. 2022 May 8;23(9):5244. doi: 10.3390/ijms23095244. Int J Mol Sci. 2022. PMID: 35563635 Free PMC article.
Massive Proteogenomic Reanalysis of Publicly Available Proteomic Datasets of Human Tissues in Search for Protein Recoding via Adenosine-to-Inosine RNA Editing.
Levitsky LI, Ivanov MV, Goncharov AO, Kliuchnikova AA, Bubis JA, Lobas AA, Solovyeva EM, Pyatnitskiy MA, Ovchinnikov RK, Kukharsky MS, Farafonova TE, Novikova SE, Zgoda VG, Tarasova IA, Gorshkov MV, Moshkovskii SA. Levitsky LI, et al. Among authors: kliuchnikova aa. J Proteome Res. 2023 Jun 2;22(6):1695-1711. doi: 10.1021/acs.jproteome.2c00740. Epub 2023 May 9. J Proteome Res. 2023. PMID: 37158322
Proteogenomics of Malignant Melanoma Cell Lines: The Effect of Stringency of Exome Data Filtering on Variant Peptide Identification in Shotgun Proteomics.
Lobas AA, Pyatnitskiy MA, Chernobrovkin AL, Ilina IY, Karpov DS, Solovyeva EM, Kuznetsova KG, Ivanov MV, Lyssuk EY, Kliuchnikova AA, Voronko OE, Larin SS, Zubarev RA, Gorshkov MV, Moshkovskii SA. Lobas AA, et al. Among authors: kliuchnikova aa. J Proteome Res. 2018 May 4;17(5):1801-1811. doi: 10.1021/acs.jproteome.7b00841. Epub 2018 Apr 16. J Proteome Res. 2018. PMID: 29619825