Evaluation of the Synthetic Potential of an AHBA Knockout Mutant of the Rifamycin Producer Amycolatopsis mediterranei

Chemistry. 2015 Dec 21;21(52):19231-42. doi: 10.1002/chem.201503548. Epub 2015 Nov 12.

Abstract

Supplementing an AHBA(-) mutant strain of Amycolatopsis mediterranei, the rifamycin producer, with a series of benzoic acid derivatives yielded new tetraketides containing different phenyl groups. These mutasynthetic studies revealed unique reductive properties of A. mediterranei towards nitro- and azidoarenes, leading to the corresponding anilines. In selected cases, the yields of mutaproducts (fermentation products isolated after feeding bacteria with chemically prepared analogs of natural building blocks) obtained are in a range (up to 118 mg L(-1)) that renders them useful as chiral building blocks for further synthetic endeavors. The configuration of the stereogenic centers at C6 and C7 was determined to be 6R,7S for one representative tetraketide. Importantly, processing beyond the tetraketide stage is not always blocked when the formation of the bicyclic naphthalene precursor cannot occur. This was proven by formation of a bromo undecaketide, an observation that has implications regarding the evolutionary development of rifamycin biosynthesis.

Keywords: antibiotics; azides; mutasynthesis; natural products; polyketide synthase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / chemistry*
  • Amino Acid Sequence
  • Anti-Bacterial Agents / biosynthesis*
  • Anti-Bacterial Agents / chemistry
  • Azides / chemistry*
  • Biological Products / chemistry*
  • Bridged Bicyclo Compounds / chemical synthesis*
  • Bridged Bicyclo Compounds / chemistry
  • Hydro-Lyases / chemical synthesis*
  • Hydro-Lyases / chemistry
  • Hydro-Lyases / metabolism
  • Magnetic Resonance Spectroscopy
  • Molecular Structure
  • Multienzyme Complexes / biosynthesis*
  • Multienzyme Complexes / chemistry*
  • Naphthalenes / chemical synthesis*
  • Naphthalenes / chemistry
  • Polyketide Synthases / chemistry*
  • Polyketide Synthases / metabolism
  • Rifamycins / biosynthesis
  • Rifamycins / chemical synthesis*
  • Rifamycins / chemistry*

Substances

  • Anti-Bacterial Agents
  • Azides
  • Biological Products
  • Bridged Bicyclo Compounds
  • Multienzyme Complexes
  • Naphthalenes
  • Rifamycins
  • Polyketide Synthases
  • 3-amino-5-hydroxybenzoic acid synthase
  • Hydro-Lyases