Current Advances in Nanotechnology for the Next Generation of Sequencing (NGS)

Biosensors (Basel). 2023 Feb 12;13(2):260. doi: 10.3390/bios13020260.

Abstract

This communication aims at discussing strategies based on developments from nanotechnology focused on the next generation of sequencing (NGS). In this regard, it should be noted that even in the advanced current situation of many techniques and methods accompanied with developments of technology, there are still existing challenges and needs focused on real samples and low concentrations of genomic materials. The approaches discussed/described adopt spectroscopical techniques and new optical setups. PCR bases are introduced to understand the role of non-covalent interactions by discussing about Nobel prizes related to genomic material detection. The review also discusses colorimetric methods, polymeric transducers, fluorescence detection methods, enhanced plasmonic techniques such as metal-enhanced fluorescence (MEF), semiconductors, and developments in metamaterials. In addition, nano-optics, challenges linked to signal transductions, and how the limitations reported in each technique could be overcome are considered in real samples. Accordingly, this study shows developments where optical active nanoplatforms generate signal detection and transduction with enhanced performances and, in many cases, enhanced signaling from single double-stranded deoxyribonucleic acid (DNA) interactions. Future perspectives on miniaturized instrumentation, chips, and devices aimed at detecting genomic material are analyzed. However, the main concept in this report derives from gained insights into nanochemistry and nano-optics. Such concepts could be incorporated into other higher-sized substrates and experimental and optical setups.

Keywords: DNA detection; enhanced strategies; genotyping; nano-devices; nano-optics; nanochemistry; nanomaterials; next generation of sequencing (NGS).

Publication types

  • Review

MeSH terms

  • DNA, Single-Stranded
  • High-Throughput Nucleotide Sequencing
  • Metals
  • Nanotechnology* / methods
  • Optics and Photonics*

Substances

  • Metals
  • DNA, Single-Stranded

Grants and funding

This research received no external funding.