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The following term was not found in PubMed: Restasari
Page 1
AFNI: what a long strange trip it's been.
Cox RW. Cox RW. Neuroimage. 2012 Aug 15;62(2):743-7. doi: 10.1016/j.neuroimage.2011.08.056. Epub 2011 Aug 27. Neuroimage. 2012. PMID: 21889996 Free PMC article. Review.
AFNI is an open source software package for the analysis and display of functional MRI data. ...One of AFNI's main strengths is its flexibility and transparency. In recent years, significant efforts have been made to increase the user-friendliness of AFNI's F …
AFNI is an open source software package for the analysis and display of functional MRI data. ...One of AFNI's main strengths i …
FMRI Clustering in AFNI: False-Positive Rates Redux.
Cox RW, Chen G, Glen DR, Reynolds RC, Taylor PA. Cox RW, et al. Brain Connect. 2017 Apr;7(3):152-171. doi: 10.1089/brain.2016.0475. Brain Connect. 2017. PMID: 28398812 Free PMC article.
Importantly, FPR statistics depends on "task" paradigm and voxelwise p value threshold; as such, we show how results of their study provide useful suggestions for FMRI study design and analysis, rather than simply a catastrophic downgrading of the field's earlier results. Regardi …
Importantly, FPR statistics depends on "task" paradigm and voxelwise p value threshold; as such, we show how results of their study provide …
Quality control practices in FMRI analysis: Philosophy, methods and examples using AFNI.
Reynolds RC, Taylor PA, Glen DR. Reynolds RC, et al. Front Neurosci. 2023 Jan 30;16:1073800. doi: 10.3389/fnins.2022.1073800. eCollection 2022. Front Neurosci. 2023. PMID: 36793774 Free PMC article.
Here we describe procedures for performing QC on acquired or publicly available FMRI datasets using the widely used AFNI software package. This work is part of the Research Topic, "Demonstrating Quality Control (QC) Procedures in fMRI." ...
Here we describe procedures for performing QC on acquired or publicly available FMRI datasets using the widely used AFNI software pac …
Beware (Surprisingly Common) Left-Right Flips in Your MRI Data: An Efficient and Robust Method to Check MRI Dataset Consistency Using AFNI.
Glen DR, Taylor PA, Buchsbaum BR, Cox RW, Reynolds RC. Glen DR, et al. Front Neuroinform. 2020 May 25;14:18. doi: 10.3389/fninf.2020.00018. eCollection 2020. Front Neuroinform. 2020. PMID: 32528270 Free PMC article.
However, we note widespread occurrences of left-right orientation errors in MRI open database repositories where volumes have contained systematic left-right flips between subject EPIs and anatomicals, due to having incorrect or missing file header information. Here we present a …
However, we note widespread occurrences of left-right orientation errors in MRI open database repositories where volumes have contained syst …
Accurate autocorrelation modeling substantially improves fMRI reliability.
Olszowy W, Aston J, Rua C, Williams GB. Olszowy W, et al. Nat Commun. 2019 Dec 25;10(1):1220. doi: 10.1038/s41467-019-09230-w. Nat Commun. 2019. PMID: 30899012 Free PMC article.
Given the recent controversies in some neuroimaging statistical methods, we compare the most frequently used functional Magnetic Resonance Imaging (fMRI) analysis packages: AFNI, FSL and SPM, with regard to temporal autocorrelation modeling. ...Here, we employ eleven datas …
Given the recent controversies in some neuroimaging statistical methods, we compare the most frequently used functional Magnetic Resonance I …
U-net model for brain extraction: Trained on humans for transfer to non-human primates.
Wang X, Li XH, Cho JW, Russ BE, Rajamani N, Omelchenko A, Ai L, Korchmaros A, Sawiak S, Benn RA, Garcia-Saldivar P, Wang Z, Kalin NH, Schroeder CE, Craddock RC, Fox AS, Evans AC, Messinger A, Milham MP, Xu T. Wang X, et al. Neuroimage. 2021 Jul 15;235:118001. doi: 10.1016/j.neuroimage.2021.118001. Epub 2021 Mar 28. Neuroimage. 2021. PMID: 33789137 Free PMC article.
Our final model outperformed brain extraction routines from popular MRI packages (AFNI, FSL, and FreeSurfer) across a heterogeneous sample from multiple sites in the PRIME-DE with less computational cost (20 s~10 min). ...
Our final model outperformed brain extraction routines from popular MRI packages (AFNI, FSL, and FreeSurfer) across a heterogeneous s …
False fMRI activation after motion correction.
Yakupov R, Lei J, Hoffmann MB, Speck O. Yakupov R, et al. Hum Brain Mapp. 2017 Sep;38(9):4497-4510. doi: 10.1002/hbm.23677. Epub 2017 Jun 5. Hum Brain Mapp. 2017. PMID: 28580597 Free PMC article.
Here we systematically evaluated the effect of retrospective motion correction with freely available fMRI analysis software packages (FSL, AFNI, and SPM) on activation maps using fMRI data acquired with prospective motion detection, to identify and quantify confounding eff …
Here we systematically evaluated the effect of retrospective motion correction with freely available fMRI analysis software packages (FSL, …
170 results