SARS-CoV-2 Detection in Fecal Sample from a Patient with Typical Findings of COVID-19 Pneumonia on CT but Negative to Multiple SARS-CoV-2 RT-PCR Tests on Oropharyngeal and Nasopharyngeal Swab Samples

Medicina (Kaunas). 2021 Mar 20;57(3):290. doi: 10.3390/medicina57030290.

Abstract

Reverse transcriptase polymerase chain reaction (RT-PCR) negative results in the upper respiratory tract represent a major concern for the clinical management of coronavirus disease 2019 (COVID-19) patients. Herein, we report the case of a 43-years-old man with a strong clinical suspicion of COVID-19, who resulted in being negative to multiple severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RT-PCR tests performed on different oropharyngeal and nasopharyngeal swabs, despite serology having confirmed the presence of SARS-CoV-2 IgM. The patient underwent a chest computed tomography (CT) that showed typical imaging findings of COVID-19 pneumonia. The presence of viral SARS-CoV-2 was confirmed only by performing a SARS-CoV-2 RT-PCR test on stool. Performing of SARS-CoV-2 RT-PCR test on fecal samples can be a rapid and useful approach to confirm COVID-19 diagnosis in cases where there is an apparent discrepancy between COVID-19 clinical symptoms coupled with chest CT and SARS-CoV-2 RT-PCR tests' results on samples from the upper respiratory tract.

Keywords: COVID-19; RT-PCR; SARS-CoV-2; chest; computed tomography; fecal swab; feces; nasopharyngeal swab; oropharyngeal swab; viral pneumonia.

Publication types

  • Case Reports

MeSH terms

  • Adult
  • Antibodies, Viral / immunology
  • COVID-19 / diagnosis*
  • COVID-19 Nucleic Acid Testing
  • COVID-19 Serological Testing
  • False Negative Reactions
  • Feces / chemistry*
  • Feces / virology
  • Humans
  • Immunoglobulin M / immunology
  • Lung / diagnostic imaging*
  • Male
  • Nasopharynx / chemistry*
  • Nasopharynx / virology
  • Oropharynx / chemistry*
  • Oropharynx / virology
  • RNA, Viral / isolation & purification*
  • SARS-CoV-2 / genetics
  • Specimen Handling
  • Tomography, X-Ray Computed

Substances

  • Antibodies, Viral
  • Immunoglobulin M
  • RNA, Viral