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2012 1
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Page 1
Decoding Heterogenous Single-cell Perturbation Responses.
Song B, Liu D, Dai W, McMyn N, Wang Q, Yang D, Krejci A, Vasilyev A, Untermoser N, Loregger A, Song D, Williams B, Rosen B, Cheng X, Chao L, Kale HT, Zhang H, Diao Y, Bürckstümmer T, Siliciano JM, Li JJ, Siliciano R, Huangfu D, Li W. Song B, et al. Among authors: krejci a. bioRxiv [Preprint]. 2023 Nov 29:2023.10.30.564796. doi: 10.1101/2023.10.30.564796. bioRxiv. 2023. PMID: 37961332 Free PMC article. Preprint.
Mapping the functional impact of non-coding regulatory elements in primary T cells through single-cell CRISPR screens.
Alda-Catalinas C, Ibarra-Soria X, Flouri C, Gordillo JE, Cousminer D, Hutchinson A, Sun B, Pembroke W, Ullrich S, Krejci A, Cortes A, Acevedo A, Malla S, Fishwick C, Drewes G, Rapiteanu R. Alda-Catalinas C, et al. Among authors: krejci a. Genome Biol. 2024 Feb 2;25(1):42. doi: 10.1186/s13059-024-03176-z. Genome Biol. 2024. PMID: 38308274 Free PMC article.
ARResT/Interrogate: an interactive immunoprofiler for IG/TR NGS data.
Bystry V, Reigl T, Krejci A, Demko M, Hanakova B, Grioni A, Knecht H, Schlitt M, Dreger P, Sellner L, Herrmann D, Pingeon M, Boudjoghra M, Rijntjes J, Pott C, Langerak AW, Groenen PJTA, Davi F, Brüggemann M, Darzentas N; EuroClonality-NGS. Bystry V, et al. Among authors: krejci a. Bioinformatics. 2017 Feb 1;33(3):435-437. doi: 10.1093/bioinformatics/btw634. Bioinformatics. 2017. PMID: 28172348
Next-generation sequencing of a combinatorial peptide phage library screened against ubiquitin identifies peptide aptamers that can inhibit the in vitro ubiquitin transfer cascade.
Lisowska M, Lickiss F, Gil-Mir M, Huart AS, Trybala Z, Way L, Hernychova L, Krejci A, Muller P, Krejcir R, Zhukow I, Jurczak P, Rodziewicz-Motowidło S, Ball K, Vojtesek B, Hupp T, Kalathiya U. Lisowska M, et al. Among authors: krejci a. Front Microbiol. 2022 Dec 2;13:875556. doi: 10.3389/fmicb.2022.875556. eCollection 2022. Front Microbiol. 2022. PMID: 36532480 Free PMC article.
Quality control and quantification in IG/TR next-generation sequencing marker identification: protocols and bioinformatic functionalities by EuroClonality-NGS.
Knecht H, Reigl T, Kotrová M, Appelt F, Stewart P, Bystry V, Krejci A, Grioni A, Pal K, Stranska K, Plevova K, Rijntjes J, Songia S, Svatoň M, Froňková E, Bartram J, Scheijen B, Herrmann D, García-Sanz R, Hancock J, Moppett J, van Dongen JJM, Cazzaniga G, Davi F, Groenen PJTA, Hummel M, Macintyre EA, Stamatopoulos K, Trka J, Langerak AW, Gonzalez D, Pott C, Brüggemann M, Darzentas N; EuroClonality-NGS Working Group. Knecht H, et al. Among authors: krejci a. Leukemia. 2019 Sep;33(9):2254-2265. doi: 10.1038/s41375-019-0499-4. Epub 2019 Jun 21. Leukemia. 2019. PMID: 31227779 Free PMC article.
On parameter synthesis by parallel model checking.
Barnat J, Brim L, Krejcí A, Streck A, Safránek D, Vejnár M, Vejpustek T. Barnat J, et al. Among authors: krejci a. IEEE/ACM Trans Comput Biol Bioinform. 2012 May-Jun;9(3):693-705. doi: 10.1109/TCBB.2011.110. IEEE/ACM Trans Comput Biol Bioinform. 2012. PMID: 21788679
Discovery of a novel ligand that modulates the protein-protein interactions of the AAA+ superfamily oncoprotein reptin.
Healy AR, Houston DR, Remnant L, Huart AS, Brychtova V, Maslon MM, Meers O, Muller P, Krejci A, Blackburn EA, Vojtesek B, Hernychova L, Walkinshaw MD, Westwood NJ, Hupp TR. Healy AR, et al. Among authors: krejci a. Chem Sci. 2015 May 1;6(5):3109-3116. doi: 10.1039/c4sc03885a. Epub 2015 Mar 20. Chem Sci. 2015. PMID: 28706685 Free PMC article.
13 results