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Year | Number of Results |
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2020 | 2 |
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Page 1
A Functional Precision Medicine Pipeline Combines Comparative Transcriptomics and Tumor Organoid Modeling to Identify Bespoke Treatment Strategies for Glioblastoma.
Cells. 2021 Dec 2;10(12):3400. doi: 10.3390/cells10123400.
Cells. 2021.
PMID: 34943910
Free PMC article.
Comparative RNA-seq analysis aids in diagnosis of a rare pediatric tumor.
Sanders LM, Rangaswami A, Bjork I, Lam DL, Beale HC, Kephart ET, Durbin A, Learned K, Currie R, Lyle AG, Pfeil J, Shah AT, Lee AG, Leung SG, Behroozfard IH, Breese MR, Peralez J, Hazard FK, Lacayo N, Spunt SL, Haussler D, Salama SR, Sweet-Cordero EA, Vaske OM.
Sanders LM, et al. Among authors: lyle ag.
Cold Spring Harb Mol Case Stud. 2019 Oct 23;5(5):a004317. doi: 10.1101/mcs.a004317. Print 2019 Oct.
Cold Spring Harb Mol Case Stud. 2019.
PMID: 31645344
Free PMC article.
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Identification of a differentiation stall in epithelial mesenchymal transition in histone H3-mutant diffuse midline glioma.
Sanders LM, Cheney A, Seninge L, van den Bout A, Chen M, Beale HC, Kephart ET, Pfeil J, Learned K, Lyle AG, Bjork I, Haussler D, Salama SR, Vaske OM.
Sanders LM, et al. Among authors: lyle ag.
Gigascience. 2020 Dec 15;9(12):giaa136. doi: 10.1093/gigascience/giaa136.
Gigascience. 2020.
PMID: 33319914
Free PMC article.
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Machine learning multi-omics analysis reveals cancer driver dysregulation in pan-cancer cell lines compared to primary tumors.
Sanders LM, Chandra R, Zebarjadi N, Beale HC, Lyle AG, Rodriguez A, Kephart ET, Pfeil J, Cheney A, Learned K, Currie R, Gitlin L, Vengerov D, Haussler D, Salama SR, Vaske OM.
Sanders LM, et al. Among authors: lyle ag.
Commun Biol. 2022 Dec 13;5(1):1367. doi: 10.1038/s42003-022-04075-4.
Commun Biol. 2022.
PMID: 36513728
Free PMC article.
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Hydra: A mixture modeling framework for subtyping pediatric cancer cohorts using multimodal gene expression signatures.
Pfeil J, Sanders LM, Anastopoulos I, Lyle AG, Weinstein AS, Xue Y, Blair A, Beale HC, Lee A, Leung SG, Dinh PT, Shah AT, Breese MR, Devine WP, Bjork I, Salama SR, Sweet-Cordero EA, Haussler D, Vaske OM.
Pfeil J, et al. Among authors: lyle ag.
PLoS Comput Biol. 2020 Apr 10;16(4):e1007753. doi: 10.1371/journal.pcbi.1007753. eCollection 2020 Apr.
PLoS Comput Biol. 2020.
PMID: 32275708
Free PMC article.
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The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets.
Beale HC, Roger JM, Cattle MA, McKay LT, Thompson DKA, Learned K, Lyle AG, Kephart ET, Currie R, Lam DL, Sanders L, Pfeil J, Vivian J, Bjork I, Salama SR, Haussler D, Vaske OM.
Beale HC, et al. Among authors: lyle ag.
Gigascience. 2021 Mar 13;10(3):giab011. doi: 10.1093/gigascience/giab011.
Gigascience. 2021.
PMID: 33712853
Free PMC article.
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