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VarFish: comprehensive DNA variant analysis for diagnostics and research.
Holtgrewe M, Stolpe O, Nieminen M, Mundlos S, Knaus A, Kornak U, Seelow D, Segebrecht L, Spielmann M, Fischer-Zirnsak B, Boschann F, Scholl U, Ehmke N, Beule D. Holtgrewe M, et al. Nucleic Acids Res. 2020 Jul 2;48(W1):W162-W169. doi: 10.1093/nar/gkaa241. Nucleic Acids Res. 2020. PMID: 32338743 Free PMC article.
In close collaboration with medical practitioners, VarFish was designed for variant analysis and prioritization in diagnostic and research settings as described in the software's extensive manual. The user interface has been optimized for supporting these protocols. ...
In close collaboration with medical practitioners, VarFish was designed for variant analysis and prioritization in diagnostic and research s …
SCelVis: exploratory single cell data analysis on the desktop and in the cloud.
Obermayer B, Holtgrewe M, Nieminen M, Messerschmidt C, Beule D. Obermayer B, et al. PeerJ. 2020 Feb 19;8:e8607. doi: 10.7717/peerj.8607. eCollection 2020. PeerJ. 2020. PMID: 32117635 Free PMC article.
Users can survey multiple interactive visualizations of their single cell expression data and cell annotation, define cell groups by filtering or manual selection and perform differential gene expression, and download raw or processed data for further offline analysis. ...
Users can survey multiple interactive visualizations of their single cell expression data and cell annotation, define cell groups by filteri …