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Spatiotemporal transmission of SARS-CoV-2 lineages during 2020-2021 in Pernambuco-Brazil.
Machado LC, Dezordi FZ, de Lima GB, de Lima RE, Silva LCA, Pereira LdM, da Silva AF, Silva Neto AMd, Oliveira ALSd, Armstrong AdC, Pessoa-E-Silva R, Loyo RM, Silva BdO, de Almeida AR, da Rocha Pitta MG, Santos FdAdS, Mendonça Siqueira M, Resende PC, Delatorre E, Naveca FG, Miyajima F, Gräf T, do Carmo RF, Pereira MC, Campos TdL, Bezerra MF, Paiva MHS, Wallau GdL; Fiocruz COVID-19 Genomic Network. Machado LC, et al. Among authors: campos tdl. Microbiol Spectr. 2024 Apr 23:e0421823. doi: 10.1128/spectrum.04218-23. Online ahead of print. Microbiol Spectr. 2024. PMID: 38651879 Free article.
HTT-DB: new features and updates.
Dotto BR, Carvalho EL, da Silva AF, Dezordi FZ, Pinto PM, Campos TL, Rezende AM, Wallau GDL. Dotto BR, et al. Database (Oxford). 2018 Jan 1;2018:bax102. doi: 10.1093/database/bax102. Database (Oxford). 2018. PMID: 29315358 Free PMC article.
Multiple introductions and country-wide spread of DENV-2 genotype II (Cosmopolitan) in Brazil.
Gräf T, Ferreira CDN, de Lima GB, de Lima RE, Machado LC, Campos TL, Schemberger MO, Faoro H, Paiva MHS, Bezerra MF, Nascimento V, Souza V, Nascimento F, Mejía M, Silva D, de Oliveira YS, Gonçalves L, Ramos TCA, de Castro DB, Arcanjo AR, Dantas HAP, Presibella MM, Fernandes SB, Gregianini TS, Paz E Silva KM, Sacchi CT, Cruz ACR, Duarte Dos Santos CN, Bispo de Filippis AM, Bello G, Wallau GL, Salvato RS, Naveca F. Gräf T, et al. Virus Evol. 2023 Sep 28;9(2):vead059. doi: 10.1093/ve/vead059. eCollection 2023. Virus Evol. 2023. PMID: 38288387 Free PMC article.
ViralFlow v1.0-a computational workflow for streamlining viral genomic surveillance.
da Silva AF, da Silva Neto AM, Aksenen CF, Jeronimo PMC, Dezordi FZ, Almeida SP, Costa HMP, Salvato RS, Campos TL, Wallau GDL, Of The Fiocruz Genomic Network OB. da Silva AF, et al. NAR Genom Bioinform. 2024 May 25;6(2):lqae056. doi: 10.1093/nargab/lqae056. eCollection 2024 Jun. NAR Genom Bioinform. 2024. PMID: 38800829 Free PMC article.
13 results