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Phylogeny, morphology, virulence, ecology, and host range of Ordospora pajunii (Ordosporidae), a microsporidian symbiont of Daphnia spp.
Dziuba MK, McIntire KM, Seto K, Davenport ES, Rogalski MA, Gowler CD, Baird E, Vaandrager M, Huerta C, Jaye R, Corcoran FE, Withrow A, Ahrendt S, Salamov A, Nolan M, Tejomurthula S, Barry K, Grigoriev IV, James TY, Duffy MA. Dziuba MK, et al. Among authors: james ty. mBio. 2024 Apr 23:e0058224. doi: 10.1128/mbio.00582-24. Online ahead of print. mBio. 2024. PMID: 38651867 Free article.
Leveraging single-cell genomics to expand the fungal tree of life.
Ahrendt SR, Quandt CA, Ciobanu D, Clum A, Salamov A, Andreopoulos B, Cheng JF, Woyke T, Pelin A, Henrissat B, Reynolds NK, Benny GL, Smith ME, James TY, Grigoriev IV. Ahrendt SR, et al. Among authors: james ty. Nat Microbiol. 2018 Dec;3(12):1417-1428. doi: 10.1038/s41564-018-0261-0. Epub 2018 Oct 8. Nat Microbiol. 2018. PMID: 30297742 Free PMC article.
A single-cell genomics pipeline for environmental microbial eukaryotes.
Ciobanu D, Clum A, Ahrendt S, Andreopoulos WB, Salamov A, Chan S, Quandt CA, Foster B, Meier-Kolthoff JP, Tang YT, Schwientek P, Benny GL, Smith ME, Bauer D, Deshpande S, Barry K, Copeland A, Singer SW, Woyke T, Grigoriev IV, James TY, Cheng JF. Ciobanu D, et al. Among authors: james ty. iScience. 2021 Mar 10;24(4):102290. doi: 10.1016/j.isci.2021.102290. eCollection 2021 Apr 23. iScience. 2021. PMID: 33870123 Free PMC article.
Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses.
Myers JM, Bonds AE, Clemons RA, Thapa NA, Simmons DR, Carter-House D, Ortanez J, Liu P, Miralles-Durán A, Desirò A, Longcore JE, Bonito G, Stajich JE, Spatafora JW, Chang Y, Corrochano LM, Gryganskyi A, Grigoriev IV, James TY. Myers JM, et al. Among authors: james ty. mBio. 2020 Sep 8;11(5):e02027-20. doi: 10.1128/mBio.02027-20. mBio. 2020. PMID: 32900807 Free PMC article.
Erratum for Myers et al., "Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses".
Myers JM, Bonds AE, Clemons RA, Thapa NA, Simmons DR, Carter-House D, Ortanez J, Liu P, Miralles-Durán A, Desirò A, Longcore JE, Bonito G, Stajich JE, Spatafora JW, Chang Y, Corrochano LM, Gryganskyi A, Grigoriev IV, James TY. Myers JM, et al. Among authors: james ty. mBio. 2020 Dec 15;11(6):e02851-20. doi: 10.1128/mBio.02851-20. mBio. 2020. PMID: 33323520 Free PMC article. No abstract available.
Diploid-dominant life cycles characterize the early evolution of Fungi.
Amses KR, Simmons DR, Longcore JE, Mondo SJ, Seto K, Jerônimo GH, Bonds AE, Quandt CA, Davis WJ, Chang Y, Federici BA, Kuo A, LaButti K, Pangilinan J, Andreopoulos W, Tritt A, Riley R, Hundley H, Johnson J, Lipzen A, Barry K, Lang BF, Cuomo CA, Buchler NE, Grigoriev IV, Spatafora JW, Stajich JE, James TY. Amses KR, et al. Among authors: james ty. Proc Natl Acad Sci U S A. 2022 Sep 6;119(36):e2116841119. doi: 10.1073/pnas.2116841119. Epub 2022 Aug 29. Proc Natl Acad Sci U S A. 2022. PMID: 36037379 Free PMC article.
Widespread adenine N6-methylation of active genes in fungi.
Mondo SJ, Dannebaum RO, Kuo RC, Louie KB, Bewick AJ, LaButti K, Haridas S, Kuo A, Salamov A, Ahrendt SR, Lau R, Bowen BP, Lipzen A, Sullivan W, Andreopoulos BB, Clum A, Lindquist E, Daum C, Northen TR, Kunde-Ramamoorthy G, Schmitz RJ, Gryganskyi A, Culley D, Magnuson J, James TY, O'Malley MA, Stajich JE, Spatafora JW, Visel A, Grigoriev IV. Mondo SJ, et al. Among authors: james ty. Nat Genet. 2017 Jun;49(6):964-968. doi: 10.1038/ng.3859. Epub 2017 May 8. Nat Genet. 2017. PMID: 28481340
147 results