Johnson RS - Search Results

1

A framework for quality control in quantitative proteomics.

Tsantilas KA, Merrihew GE, Robbins JE, Johnson RS, Park J, Plubell DL, Huang E, Riffle M, Sharma V, MacLean BX, Eckels J, Wu CC, Bereman MS, Spencer SE, Hoofnagle AN, MacCoss MJ. Tsantilas KA, et al. Among authors: johnson rs. bioRxiv [Preprint]. 2024 Apr 25:2024.04.12.589318. doi: 10.1101/2024.04.12.589318. bioRxiv. 2024. PMID: 38645098 Free PMC article. Preprint.

2

Implementation of statistical process control for proteomic experiments via LC MS/MS.

Bereman MS, Johnson R, Bollinger J, Boss Y, Shulman N, MacLean B, Hoofnagle AN, MacCoss MJ. Bereman MS, et al. J Am Soc Mass Spectrom. 2014 Apr;25(4):581-7. doi: 10.1007/s13361-013-0824-5. Epub 2014 Feb 5. J Am Soc Mass Spectrom. 2014. PMID: 24496601 Free PMC article.

3

MBNL1 regulates programmed postnatal switching between regenerative and differentiated cardiac states.

Bailey LRJ, Bugg D, Reichardt IM, Ortaç CD, Gunaje J, Johnson R, MacCoss MJ, Sakamoto T, Kelly DP, Regnier M, Davis JM. Bailey LRJ, et al. bioRxiv [Preprint]. 2023 Mar 16:2023.03.16.532974. doi: 10.1101/2023.03.16.532974. bioRxiv. 2023. PMID: 36993225 Free PMC article. Updated. Preprint.

4

Improving Precursor Selectivity in Data-Independent Acquisition Using Overlapping Windows.

Amodei D, Egertson J, MacLean BX, Johnson R, Merrihew GE, Keller A, Marsh D, Vitek O, Mallick P, MacCoss MJ. Amodei D, et al. J Am Soc Mass Spectrom. 2019 Apr;30(4):669-684. doi: 10.1007/s13361-018-2122-8. Epub 2019 Jan 22. J Am Soc Mass Spectrom. 2019. PMID: 30671891 Free PMC article.

5

Multiplexed peptide analysis using data-independent acquisition and Skyline.

Egertson JD, MacLean B, Johnson R, Xuan Y, MacCoss MJ. Egertson JD, et al. Nat Protoc. 2015 Jun;10(6):887-903. doi: 10.1038/nprot.2015.055. Epub 2015 May 21. Nat Protoc. 2015. PMID: 25996789 Free PMC article.

6

Novel phosphorylation states of the yeast spindle pole body.

Fong KK, Zelter A, Graczyk B, Hoyt JM, Riffle M, Johnson R, MacCoss MJ, Davis TN. Fong KK, et al. Biol Open. 2018 Oct 8;7(10):bio033647. doi: 10.1242/bio.033647. Biol Open. 2018. PMID: 29903865 Free PMC article.

7

Kojak: efficient analysis of chemically cross-linked protein complexes.

Hoopmann MR, Zelter A, Johnson RS, Riffle M, MacCoss MJ, Davis TN, Moritz RL. Hoopmann MR, et al. Among authors: johnson rs. J Proteome Res. 2015 May 1;14(5):2190-8. doi: 10.1021/pr501321h. Epub 2015 Apr 15. J Proteome Res. 2015. PMID: 25812159 Free PMC article.

8

Identification of Actin Filament-Associated Proteins in Giardia lamblia.

Steele-Ogus MC, Johnson RS, MacCoss MJ, Paredez AR. Steele-Ogus MC, et al. Among authors: johnson rs. Microbiol Spectr. 2021 Sep 3;9(1):e0055821. doi: 10.1128/Spectrum.00558-21. Epub 2021 Jul 21. Microbiol Spectr. 2021. PMID: 34287056 Free PMC article.

9

Activity dependent dissociation of the Homer1 interactome.

Stillman M, Lautz JD, Johnson RS, MacCoss MJ, Smith SEP. Stillman M, et al. Among authors: johnson rs. Sci Rep. 2022 Feb 25;12(1):3207. doi: 10.1038/s41598-022-07179-3. Sci Rep. 2022. PMID: 35217690 Free PMC article.

10

Selecting Optimal Peptides for Targeted Proteomic Experiments in Human Plasma Using In Vitro Synthesized Proteins as Analytical Standards.

Bollinger JG, Stergachis AB, Johnson RS, Egertson JD, MacCoss MJ. Bollinger JG, et al. Among authors: johnson rs. Methods Mol Biol. 2016;1410:207-21. doi: 10.1007/978-1-4939-3524-6_12. Methods Mol Biol. 2016. PMID: 26867746 Free PMC article.

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