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Novel multi-cluster workflow system to support real-time HPC-enabled epidemic science: Investigating the impact of vaccine acceptance on COVID-19 spread.
Bhattacharya P, Machi D, Chen J, Hoops S, Lewis B, Mortveit H, Venkatramanan S, Wilson ML, Marathe A, Porebski P, Klahn B, Outten J, Vullikanti A, Xie D, Adiga A, Brown S, Barrett C, Marathe M. Bhattacharya P, et al. Among authors: mortveit h. J Parallel Distrib Comput. 2024 Sep;191:104899. doi: 10.1016/j.jpdc.2024.104899. Epub 2024 May 4. J Parallel Distrib Comput. 2024. PMID: 38774820
Potential impact of annual vaccination with reformulated COVID-19 vaccines: Lessons from the US COVID-19 scenario modeling hub.
Jung SM, Loo SL, Howerton E, Contamin L, Smith CP, Carcelén EC, Yan K, Bents SJ, Levander J, Espino J, Lemaitre JC, Sato K, McKee CD, Hill AL, Chinazzi M, Davis JT, Mu K, Vespignani A, Rosenstrom ET, Rodriguez-Cartes SA, Ivy JS, Mayorga ME, Swann JL, España G, Cavany S, Moore SM, Perkins TA, Chen S, Paul R, Janies D, Thill JC, Srivastava A, Aawar MA, Bi K, Bandekar SR, Bouchnita A, Fox SJ, Meyers LA, Porebski P, Venkatramanan S, Adiga A, Hurt B, Klahn B, Outten J, Chen J, Mortveit H, Wilson A, Hoops S, Bhattacharya P, Machi D, Vullikanti A, Lewis B, Marathe M, Hochheiser H, Runge MC, Shea K, Truelove S, Viboud C, Lessler J. Jung SM, et al. Among authors: mortveit h. PLoS Med. 2024 Apr 17;21(4):e1004387. doi: 10.1371/journal.pmed.1004387. eCollection 2024 Apr. PLoS Med. 2024. PMID: 38630802 Free PMC article.
An agent-based framework to study forced migration: A case study of Ukraine.
Mehrab Z, Stundal L, Venkatramanan S, Swarup S, Lewis B, Mortveit HS, Barrett CL, Pandey A, Wells CR, Galvani AP, Singer BH, Leblang D, Colwell RR, Marathe MV. Mehrab Z, et al. Among authors: mortveit hs. PNAS Nexus. 2024 Mar 19;3(3):pgae080. doi: 10.1093/pnasnexus/pgae080. eCollection 2024 Mar. PNAS Nexus. 2024. PMID: 38505694 Free PMC article.
Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty.
Howerton E, Contamin L, Mullany LC, Qin M, Reich NG, Bents S, Borchering RK, Jung SM, Loo SL, Smith CP, Levander J, Kerr J, Espino J, van Panhuis WG, Hochheiser H, Galanti M, Yamana T, Pei S, Shaman J, Rainwater-Lovett K, Kinsey M, Tallaksen K, Wilson S, Shin L, Lemaitre JC, Kaminsky J, Hulse JD, Lee EC, McKee CD, Hill A, Karlen D, Chinazzi M, Davis JT, Mu K, Xiong X, Pastore Y Piontti A, Vespignani A, Rosenstrom ET, Ivy JS, Mayorga ME, Swann JL, España G, Cavany S, Moore S, Perkins A, Hladish T, Pillai A, Ben Toh K, Longini I Jr, Chen S, Paul R, Janies D, Thill JC, Bouchnita A, Bi K, Lachmann M, Fox SJ, Meyers LA, Srivastava A, Porebski P, Venkatramanan S, Adiga A, Lewis B, Klahn B, Outten J, Hurt B, Chen J, Mortveit H, Wilson A, Marathe M, Hoops S, Bhattacharya P, Machi D, Cadwell BL, Healy JM, Slayton RB, Johansson MA, Biggerstaff M, Truelove S, Runge MC, Shea K, Viboud C, Lessler J. Howerton E, et al. Among authors: mortveit h. Nat Commun. 2023 Nov 20;14(1):7260. doi: 10.1038/s41467-023-42680-x. Nat Commun. 2023. PMID: 37985664 Free PMC article.
Potential impact of annual vaccination with reformulated COVID-19 vaccines: lessons from the U.S. COVID-19 Scenario Modeling Hub.
Jung SM, Loo SL, Howerton E, Contamin L, Smith CP, Carcelén EC, Yan K, Bents SJ, Levander J, Espino J, Lemaitre JC, Sato K, McKee CD, Hill AL, Chinazzi M, Davis JT, Mu K, Vespignani A, Rosenstrom ET, Rodriguez-Cartes SA, Ivy JS, Mayorga ME, Swann JL, España G, Cavany S, Moore SM, Perkins A, Chen S, Paul R, Janies D, Thill JC, Srivastava A, Al Aawar M, Bi K, Bandekar SR, Bouchnita A, Fox SJ, Meyers LA, Porebski P, Venkatramanan S, Adiga A, Hurt B, Klahn B, Outten J, Chen J, Mortveit H, Wilson A, Hoops S, Bhattacharya P, Machi D, Vullikanti A, Lewis B, Marathe M, Hochheiser H, Runge MC, Shea K, Truelove S, Viboud C, Lessler J. Jung SM, et al. Among authors: mortveit h. medRxiv [Preprint]. 2023 Nov 18:2023.10.26.23297581. doi: 10.1101/2023.10.26.23297581. medRxiv. 2023. PMID: 37961207 Free PMC article. Updated. Preprint.
Informing pandemic response in the face of uncertainty. An evaluation of the U.S. COVID-19 Scenario Modeling Hub.
Howerton E, Contamin L, Mullany LC, Qin M, Reich NG, Bents S, Borchering RK, Jung SM, Loo SL, Smith CP, Levander J, Kerr J, Espino J, van Panhuis WG, Hochheiser H, Galanti M, Yamana T, Pei S, Shaman J, Rainwater-Lovett K, Kinsey M, Tallaksen K, Wilson S, Shin L, Lemaitre JC, Kaminsky J, Hulse JD, Lee EC, McKee C, Hill A, Karlen D, Chinazzi M, Davis JT, Mu K, Xiong X, Piontti APY, Vespignani A, Rosenstrom ET, Ivy JS, Mayorga ME, Swann JL, España G, Cavany S, Moore S, Perkins A, Hladish T, Pillai A, Toh KB, Longini I Jr, Chen S, Paul R, Janies D, Thill JC, Bouchnita A, Bi K, Lachmann M, Fox S, Meyers LA; UT COVID-19 Modeling Consortium; Srivastava A, Porebski P, Venkatramanan S, Adiga A, Lewis B, Klahn B, Outten J, Hurt B, Chen J, Mortveit H, Wilson A, Marathe M, Hoops S, Bhattacharya P, Machi D, Cadwell BL, Healy JM, Slayton RB, Johansson MA, Biggerstaff M, Truelove S, Runge MC, Shea K, Viboud C, Lessler J. Howerton E, et al. Among authors: mortveit h. medRxiv [Preprint]. 2023 Jul 3:2023.06.28.23291998. doi: 10.1101/2023.06.28.23291998. medRxiv. 2023. PMID: 37461674 Free PMC article. Updated. Preprint.
A 10-year prospectus for mathematical epidemiology.
Orr M, Mortveit HS, Lebiere C, Pirolli P. Orr M, et al. Among authors: mortveit hs. Front Psychol. 2023 Jun 9;14:986289. doi: 10.3389/fpsyg.2023.986289. eCollection 2023. Front Psychol. 2023. PMID: 37359865 Free PMC article.
Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support.
Bhattacharya P, Chen J, Hoops S, Machi D, Lewis B, Venkatramanan S, Wilson ML, Klahn B, Adiga A, Hurt B, Outten J, Adiga A, Warren A, Baek YY, Porebski P, Marathe A, Xie D, Swarup S, Vullikanti A, Mortveit H, Eubank S, Barrett CL, Marathe M. Bhattacharya P, et al. Among authors: mortveit h. Int J High Perform Comput Appl. 2023 Jan;37(1):4-27. doi: 10.1177/10943420221127034. Int J High Perform Comput Appl. 2023. PMID: 38603425 Free PMC article.
31 results