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The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars.
Salojärvi J, Rambani A, Yu Z, Guyot R, Strickler S, Lepelley M, Wang C, Rajaraman S, Rastas P, Zheng C, Muñoz DS, Meidanis J, Paschoal AR, Bawin Y, Krabbenhoft TJ, Wang ZQ, Fleck SJ, Aussel R, Bellanger L, Charpagne A, Fournier C, Kassam M, Lefebvre G, Métairon S, Moine D, Rigoreau M, Stolte J, Hamon P, Couturon E, Tranchant-Dubreuil C, Mukherjee M, Lan T, Engelhardt J, Stadler P, Correia De Lemos SM, Suzuki SI, Sumirat U, Wai CM, Dauchot N, Orozco-Arias S, Garavito A, Kiwuka C, Musoli P, Nalukenge A, Guichoux E, Reinout H, Smit M, Carretero-Paulet L, Filho OG, Braghini MT, Padilha L, Sera GH, Ruttink T, Henry R, Marraccini P, Van de Peer Y, Andrade A, Domingues D, Giuliano G, Mueller L, Pereira LF, Plaisance S, Poncet V, Rombauts S, Sankoff D, Albert VA, Crouzillat D, de Kochko A, Descombes P. Salojärvi J, et al. Among authors: domingues d. Nat Genet. 2024 Apr;56(4):721-731. doi: 10.1038/s41588-024-01695-w. Epub 2024 Apr 15. Nat Genet. 2024. PMID: 38622339 Free PMC article.
Genome-wide association study reveals candidate genes influencing lipids and diterpenes contents in Coffea arabica L.
Sant'Ana GC, Pereira LFP, Pot D, Ivamoto ST, Domingues DS, Ferreira RV, Pagiatto NF, da Silva BSR, Nogueira LM, Kitzberger CSG, Scholz MBS, de Oliveira FF, Sera GH, Padilha L, Labouisse JP, Guyot R, Charmetant P, Leroy T. Sant'Ana GC, et al. Among authors: domingues ds. Sci Rep. 2018 Jan 11;8(1):465. doi: 10.1038/s41598-017-18800-1. Sci Rep. 2018. PMID: 29323254 Free PMC article.
Genome mining of metabolic gene clusters in the Rubiaceae family.
Correia de Lemos SM, Paschoal AR, Guyot R, Medema M, Domingues DS. Correia de Lemos SM, et al. Among authors: domingues ds. Comput Struct Biotechnol J. 2023 Nov 20;23:22-33. doi: 10.1016/j.csbj.2023.11.034. eCollection 2024 Dec. Comput Struct Biotechnol J. 2023. PMID: 38075396 Free PMC article.
mirtronDB: a mirtron knowledge base.
Da Fonseca BHR, Domingues DS, Paschoal AR. Da Fonseca BHR, et al. Bioinformatics. 2019 Oct 1;35(19):3873-3874. doi: 10.1093/bioinformatics/btz153. Bioinformatics. 2019. PMID: 30874795 Free PMC article.
83 results