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The ICU environment contributes to the endemicity of the "Serratia marcescens complex" in the hospital setting.
Aracil-Gisbert S, Fernández-De-Bobadilla MD, Guerra-Pinto N, Serrano-Calleja S, Pérez-Cobas AE, Soriano C, de Pablo R, Lanza VF, Pérez-Viso B, Reuters S, Hasman H, Cantón R, Baquero F, Coque TM. Aracil-Gisbert S, et al. Among authors: fernandez de bobadilla md. mBio. 2024 May 8;15(5):e0305423. doi: 10.1128/mbio.03054-23. Epub 2024 Apr 2. mBio. 2024. PMID: 38564701 Free PMC article.
Statistical Analysis of Accessory Genome.
Fernández-de-Bobadilla MD, Coque TM, Lanza VF. Fernández-de-Bobadilla MD, et al. Methods Mol Biol. 2020;2075:341-353. doi: 10.1007/978-1-4939-9877-7_24. Methods Mol Biol. 2020. PMID: 31584174
A 21-Year Survey of Escherichia coli from Bloodstream Infections (BSI) in a Tertiary Hospital Reveals How Community-Hospital Dynamics of B2 Phylogroup Clones Influence Local BSI Rates.
Rodríguez I, Figueiredo AS, Sousa M, Aracil-Gisbert S, Fernández-de-Bobadilla MD, Lanza VF, Rodríguez C, Zamora J, Loza E, Mingo P, Brooks CJ, Cantón R, Baquero F, Coque TM. Rodríguez I, et al. Among authors: fernandez de bobadilla md. mSphere. 2021 Dec 22;6(6):e0086821. doi: 10.1128/msphere.00868-21. Epub 2021 Dec 22. mSphere. 2021. PMID: 34935444 Free PMC article.
PATO: Pangenome Analysis Toolkit.
Fernández-de-Bobadilla MD, Talavera-Rodríguez A, Chacón L, Baquero F, Coque TM, Lanza VF. Fernández-de-Bobadilla MD, et al. Bioinformatics. 2021 Dec 7;37(23):4564-4566. doi: 10.1093/bioinformatics/btab697. Bioinformatics. 2021. PMID: 34623430