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Page 1
The complex polyploid genome architecture of sugarcane.
Healey AL, Garsmeur O, Lovell JT, Shengquiang S, Sreedasyam A, Jenkins J, Plott CB, Piperidis N, Pompidor N, Llaca V, Metcalfe CJ, Doležel J, Cápal P, Carlson JW, Hoarau JY, Hervouet C, Zini C, Dievart A, Lipzen A, Williams M, Boston LB, Webber J, Keymanesh K, Tejomurthula S, Rajasekar S, Suchecki R, Furtado A, May G, Parakkal P, Simmons BA, Barry K, Henry RJ, Grimwood J, Aitken KS, Schmutz J, D'Hont A. Healey AL, et al. Among authors: grimwood j. Nature. 2024 Apr;628(8009):804-810. doi: 10.1038/s41586-024-07231-4. Epub 2024 Mar 27. Nature. 2024. PMID: 38538783 Free PMC article.
A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci.
Mamidi S, Healey A, Huang P, Grimwood J, Jenkins J, Barry K, Sreedasyam A, Shu S, Lovell JT, Feldman M, Wu J, Yu Y, Chen C, Johnson J, Sakakibara H, Kiba T, Sakurai T, Tavares R, Nusinow DA, Baxter I, Schmutz J, Brutnell TP, Kellogg EA. Mamidi S, et al. Among authors: grimwood j. Nat Biotechnol. 2020 Oct;38(10):1203-1210. doi: 10.1038/s41587-020-0681-2. Epub 2020 Oct 5. Nat Biotechnol. 2020. PMID: 33020633 Free PMC article.
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass.
Lovell JT, MacQueen AH, Mamidi S, Bonnette J, Jenkins J, Napier JD, Sreedasyam A, Healey A, Session A, Shu S, Barry K, Bonos S, Boston L, Daum C, Deshpande S, Ewing A, Grabowski PP, Haque T, Harrison M, Jiang J, Kudrna D, Lipzen A, Pendergast TH 4th, Plott C, Qi P, Saski CA, Shakirov EV, Sims D, Sharma M, Sharma R, Stewart A, Singan VR, Tang Y, Thibivillier S, Webber J, Weng X, Williams M, Wu GA, Yoshinaga Y, Zane M, Zhang L, Zhang J, Behrman KD, Boe AR, Fay PA, Fritschi FB, Jastrow JD, Lloyd-Reilley J, Martínez-Reyna JM, Matamala R, Mitchell RB, Rouquette FM Jr, Ronald P, Saha M, Tobias CM, Udvardi M, Wing RA, Wu Y, Bartley LE, Casler M, Devos KM, Lowry DB, Rokhsar DS, Grimwood J, Juenger TE, Schmutz J. Lovell JT, et al. Among authors: grimwood j. Nature. 2021 Feb;590(7846):438-444. doi: 10.1038/s41586-020-03127-1. Epub 2021 Jan 27. Nature. 2021. PMID: 33505029 Free PMC article.
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding.
Lovell JT, Bentley NB, Bhattarai G, Jenkins JW, Sreedasyam A, Alarcon Y, Bock C, Boston LB, Carlson J, Cervantes K, Clermont K, Duke S, Krom N, Kubenka K, Mamidi S, Mattison CP, Monteros MJ, Pisani C, Plott C, Rajasekar S, Rhein HS, Rohla C, Song M, Hilaire RS, Shu S, Wells L, Webber J, Heerema RJ, Klein PE, Conner P, Wang X, Grauke LJ, Grimwood J, Schmutz J, Randall JJ. Lovell JT, et al. Among authors: grimwood j. Nat Commun. 2021 Jul 5;12(1):4125. doi: 10.1038/s41467-021-24328-w. Nat Commun. 2021. PMID: 34226565 Free PMC article.
The first complete human genome.
Lovell JT, Grimwood J. Lovell JT, et al. Among authors: grimwood j. Nature. 2022 Jun;606(7914):468-469. doi: 10.1038/d41586-022-01368-w. Nature. 2022. PMID: 35606432 No abstract available.
Dynamic genome evolution in a model fern.
Marchant DB, Chen G, Cai S, Chen F, Schafran P, Jenkins J, Shu S, Plott C, Webber J, Lovell JT, He G, Sandor L, Williams M, Rajasekar S, Healey A, Barry K, Zhang Y, Sessa E, Dhakal RR, Wolf PG, Harkess A, Li FW, Rössner C, Becker A, Gramzow L, Xue D, Wu Y, Tong T, Wang Y, Dai F, Hua S, Wang H, Xu S, Xu F, Duan H, Theißen G, McKain MR, Li Z, McKibben MTW, Barker MS, Schmitz RJ, Stevenson DW, Zumajo-Cardona C, Ambrose BA, Leebens-Mack JH, Grimwood J, Schmutz J, Soltis PS, Soltis DE, Chen ZH. Marchant DB, et al. Among authors: grimwood j. Nat Plants. 2022 Sep;8(9):1038-1051. doi: 10.1038/s41477-022-01226-7. Epub 2022 Sep 1. Nat Plants. 2022. PMID: 36050461 Free PMC article.
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics.
Healey AL, Piatkowski B, Lovell JT, Sreedasyam A, Carey SB, Mamidi S, Shu S, Plott C, Jenkins J, Lawrence T, Aguero B, Carrell AA, Nieto-Lugilde M, Talag J, Duffy A, Jawdy S, Carter KR, Boston LB, Jones T, Jaramillo-Chico J, Harkess A, Barry K, Keymanesh K, Bauer D, Grimwood J, Gunter L, Schmutz J, Weston DJ, Shaw AJ. Healey AL, et al. Among authors: grimwood j. Nat Plants. 2023 Feb;9(2):238-254. doi: 10.1038/s41477-022-01333-5. Epub 2023 Feb 6. Nat Plants. 2023. PMID: 36747050 Free PMC article.
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement.
Chen ZJ, Sreedasyam A, Ando A, Song Q, De Santiago LM, Hulse-Kemp AM, Ding M, Ye W, Kirkbride RC, Jenkins J, Plott C, Lovell J, Lin YM, Vaughn R, Liu B, Simpson S, Scheffler BE, Wen L, Saski CA, Grover CE, Hu G, Conover JL, Carlson JW, Shu S, Boston LB, Williams M, Peterson DG, McGee K, Jones DC, Wendel JF, Stelly DM, Grimwood J, Schmutz J. Chen ZJ, et al. Among authors: grimwood j. Nat Genet. 2020 May;52(5):525-533. doi: 10.1038/s41588-020-0614-5. Epub 2020 Apr 20. Nat Genet. 2020. PMID: 32313247 Free PMC article.
The tepary bean genome provides insight into evolution and domestication under heat stress.
Moghaddam SM, Oladzad A, Koh C, Ramsay L, Hart JP, Mamidi S, Hoopes G, Sreedasyam A, Wiersma A, Zhao D, Grimwood J, Hamilton JP, Jenkins J, Vaillancourt B, Wood JC, Schmutz J, Kagale S, Porch T, Bett KE, Buell CR, McClean PE. Moghaddam SM, et al. Among authors: grimwood j. Nat Commun. 2021 May 11;12(1):2638. doi: 10.1038/s41467-021-22858-x. Nat Commun. 2021. PMID: 33976152 Free PMC article.
Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet.
Devos KM, Qi P, Bahri BA, Gimode DM, Jenike K, Manthi SJ, Lule D, Lux T, Martinez-Bello L, Pendergast TH 4th, Plott C, Saha D, Sidhu GS, Sreedasyam A, Wang X, Wang H, Wright H, Zhao J, Deshpande S, de Villiers S, Dida MM, Grimwood J, Jenkins J, Lovell J, Mayer KFX, Mneney EE, Ojulong HF, Schatz MC, Schmutz J, Song B, Tesfaye K, Odeny DA. Devos KM, et al. Among authors: grimwood j. Nat Commun. 2023 Jun 21;14(1):3694. doi: 10.1038/s41467-023-38915-6. Nat Commun. 2023. PMID: 37344528 Free PMC article.
191 results