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Targeted metagenomics reveals association between severity and pathogen co-detection in infants with respiratory syncytial virus.
Lin GL, Drysdale SB, Snape MD, O'Connor D, Brown A, MacIntyre-Cockett G, Mellado-Gomez E, de Cesare M, Ansari MA, Bonsall D, Bray JE, Jolley KA, Bowden R, Aerssens J, Bont L, Openshaw PJM, Martinon-Torres F, Nair H, Golubchik T, Pollard AJ; RESCEU Consortium. Lin GL, et al. Among authors: jolley ka. Nat Commun. 2024 Mar 16;15(1):2379. doi: 10.1038/s41467-024-46648-3. Nat Commun. 2024. PMID: 38493135 Free PMC article.
Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing.
Dingle KE, Didelot X, Ansari MA, Eyre DW, Vaughan A, Griffiths D, Ip CL, Batty EM, Golubchik T, Bowden R, Jolley KA, Hood DW, Fawley WN, Walker AS, Peto TE, Wilcox MH, Crook DW. Dingle KE, et al. Among authors: jolley ka. J Infect Dis. 2013 Feb 15;207(4):675-86. doi: 10.1093/infdis/jis734. Epub 2012 Nov 29. J Infect Dis. 2013. PMID: 23204167 Free PMC article.
MLST revisited: the gene-by-gene approach to bacterial genomics.
Maiden MC, Jansen van Rensburg MJ, Bray JE, Earle SG, Ford SA, Jolley KA, McCarthy ND. Maiden MC, et al. Among authors: jolley ka. Nat Rev Microbiol. 2013 Oct;11(10):728-36. doi: 10.1038/nrmicro3093. Epub 2013 Sep 2. Nat Rev Microbiol. 2013. PMID: 23979428 Free PMC article. Review.
Defining the estimated core genome of bacterial populations using a Bayesian decision model.
van Tonder AJ, Mistry S, Bray JE, Hill DM, Cody AJ, Farmer CL, Klugman KP, von Gottberg A, Bentley SD, Parkhill J, Jolley KA, Maiden MC, Brueggemann AB. van Tonder AJ, et al. Among authors: jolley ka. PLoS Comput Biol. 2014 Aug 21;10(8):e1003788. doi: 10.1371/journal.pcbi.1003788. eCollection 2014 Aug. PLoS Comput Biol. 2014. PMID: 25144616 Free PMC article.
Genomics Reveals the Worldwide Distribution of Multidrug-Resistant Serotype 6E Pneumococci.
van Tonder AJ, Bray JE, Roalfe L, White R, Zancolli M, Quirk SJ, Haraldsson G, Jolley KA, Maiden MC, Bentley SD, Haraldsson Á, Erlendsdóttir H, Kristinsson KG, Goldblatt D, Brueggemann AB. van Tonder AJ, et al. Among authors: jolley ka. J Clin Microbiol. 2015 Jul;53(7):2271-85. doi: 10.1128/JCM.00744-15. Epub 2015 May 13. J Clin Microbiol. 2015. PMID: 25972423 Free PMC article.
Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.
Harris LG, Murray S, Pascoe B, Bray J, Meric G, Mageiros L, Wilkinson TS, Jeeves R, Rohde H, Schwarz S, de Lencastre H, Miragaia M, Rolo J, Bowden R, Jolley KA, Maiden MC, Mack D, Sheppard SK. Harris LG, et al. Among authors: jolley ka. PLoS One. 2016 Mar 15;11(3):e0151240. doi: 10.1371/journal.pone.0151240. eCollection 2016. PLoS One. 2016. PMID: 26978068 Free PMC article.
Correction for van Tonder et al., Genomics Reveals the Worldwide Distribution of Multidrug-Resistant Serotype 6E Pneumococci.
van Tonder AJ, Bray JE, Roalfe L, White R, Zancolli M, Quirk SJ, Haraldsson G, Jolley KA, Maiden MCJ, Bentley SD, Haraldsson Á, Erlendsdóttir H, Kristinsson KG, Goldblatt D, Brueggemann AB. van Tonder AJ, et al. Among authors: jolley ka. J Clin Microbiol. 2016 Jun;54(6):1670. doi: 10.1128/JCM.00619-16. J Clin Microbiol. 2016. PMID: 27217386 Free PMC article. No abstract available.
Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus.
Murray S, Pascoe B, Méric G, Mageiros L, Yahara K, Hitchings MD, Friedmann Y, Wilkinson TS, Gormley FJ, Mack D, Bray JE, Lamble S, Bowden R, Jolley KA, Maiden MCJ, Wendlandt S, Schwarz S, Corander J, Fitzgerald JR, Sheppard SK. Murray S, et al. Among authors: jolley ka. Genome Biol Evol. 2017 Apr 1;9(4):830-842. doi: 10.1093/gbe/evx037. Genome Biol Evol. 2017. PMID: 28338786 Free PMC article.
157 results