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Chromatin accessibility profiling methods.
Minnoye L, Marinov GK, Krausgruber T, Pan L, Marand AP, Secchia S, Greenleaf WJ, Furlong EEM, Zhao K, Schmitz RJ, Bock C, Aerts S. Minnoye L, et al. Among authors: schmitz rj. Nat Rev Methods Primers. 2021;1:10. doi: 10.1038/s43586-020-00008-9. Epub 2021 Jan 21. Nat Rev Methods Primers. 2021. PMID: 38410680 Free PMC article.
Widespread long-range cis-regulatory elements in the maize genome.
Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, Buckler ES, Gallavotti A, Springer NM, Schmitz RJ, Zhang X. Ricci WA, et al. Among authors: schmitz rj. Nat Plants. 2019 Dec;5(12):1237-1249. doi: 10.1038/s41477-019-0547-0. Epub 2019 Nov 18. Nat Plants. 2019. PMID: 31740773 Free PMC article.
Author Correction: Widespread long-range cis-regulatory elements in the maize genome.
Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, Buckler ES, Gallavotti A, Springer NM, Schmitz RJ, Zhang X. Ricci WA, et al. Among authors: schmitz rj. Nat Plants. 2020 Mar;6(3):328. doi: 10.1038/s41477-020-0600-z. Nat Plants. 2020. PMID: 32029893
A cis-regulatory atlas in maize at single-cell resolution.
Marand AP, Chen Z, Gallavotti A, Schmitz RJ. Marand AP, et al. Among authors: schmitz rj. Cell. 2021 May 27;184(11):3041-3055.e21. doi: 10.1016/j.cell.2021.04.014. Epub 2021 May 7. Cell. 2021. PMID: 33964211 Free article.
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes.
Hufford MB, Seetharam AS, Woodhouse MR, Chougule KM, Ou S, Liu J, Ricci WA, Guo T, Olson A, Qiu Y, Della Coletta R, Tittes S, Hudson AI, Marand AP, Wei S, Lu Z, Wang B, Tello-Ruiz MK, Piri RD, Wang N, Kim DW, Zeng Y, O'Connor CH, Li X, Gilbert AM, Baggs E, Krasileva KV, Portwood JL 2nd, Cannon EKS, Andorf CM, Manchanda N, Snodgrass SJ, Hufnagel DE, Jiang Q, Pedersen S, Syring ML, Kudrna DA, Llaca V, Fengler K, Schmitz RJ, Ross-Ibarra J, Yu J, Gent JI, Hirsch CN, Ware D, Dawe RK. Hufford MB, et al. Among authors: schmitz rj. Science. 2021 Aug 6;373(6555):655-662. doi: 10.1126/science.abg5289. Science. 2021. PMID: 34353948 Free PMC article.
Single-cell analysis of cis-regulatory elements.
Marand AP, Schmitz RJ. Marand AP, et al. Among authors: schmitz rj. Curr Opin Plant Biol. 2022 Feb;65:102094. doi: 10.1016/j.pbi.2021.102094. Epub 2021 Aug 12. Curr Opin Plant Biol. 2022. PMID: 34390932 Review.
260 results