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Help biocurators to maximize the reach of your data.
Holmes A, Carvalho-Silva D, Sondka Z, Ahmed M, Argasinska J, Lyne R, Sangrador-Vegas A, Ward S. Holmes A, et al. Among authors: lyne r. PLoS Biol. 2024 Jan 25;22(1):e3002477. doi: 10.1371/journal.pbio.3002477. eCollection 2024 Jan. PLoS Biol. 2024. PMID: 38271296 Free PMC article.
COSMIC: a curated database of somatic variants and clinical data for cancer.
Sondka Z, Dhir NB, Carvalho-Silva D, Jupe S, Madhumita, McLaren K, Starkey M, Ward S, Wilding J, Ahmed M, Argasinska J, Beare D, Chawla MS, Duke S, Fasanella I, Neogi AG, Haller S, Hetenyi B, Hodges L, Holmes A, Lyne R, Maurel T, Nair S, Pedro H, Sangrador-Vegas A, Schuilenburg H, Sheard Z, Yong SY, Teague J. Sondka Z, et al. Among authors: lyne r. Nucleic Acids Res. 2024 Jan 5;52(D1):D1210-D1217. doi: 10.1093/nar/gkad986. Nucleic Acids Res. 2024. PMID: 38183204 Free PMC article.
Identification of multiple transcription factor genes potentially involved in the development of electrosensory versus mechanosensory lateral line organs.
Minařík M, Modrell MS, Gillis JA, Campbell AS, Fuller I, Lyne R, Micklem G, Gela D, Pšenička M, Baker CVH. Minařík M, et al. Among authors: lyne r. Front Cell Dev Biol. 2024 Mar 18;12:1327924. doi: 10.3389/fcell.2024.1327924. eCollection 2024. Front Cell Dev Biol. 2024. PMID: 38562141 Free PMC article.
HumanMine: advanced data searching, analysis and cross-species comparison.
Lyne R, Bazaga A, Butano D, Contrino S, Heimbach J, Hu F, Kalderimis A, Lyne M, Reierskog K, Stepan R, Sullivan J, Wise A, Yehudi Y, Micklem G. Lyne R, et al. Database (Oxford). 2022 Jul 12;2022:baac054. doi: 10.1093/database/baac054. Database (Oxford). 2022. PMID: 35820040 Free PMC article.
InterMineR: an R package for InterMine databases.
Kyritsis KA, Wang B, Sullivan J, Lyne R, Micklem G. Kyritsis KA, et al. Among authors: lyne r. Bioinformatics. 2019 Sep 1;35(17):3206-3207. doi: 10.1093/bioinformatics/btz039. Bioinformatics. 2019. PMID: 30668641 Free PMC article.
Cross-organism analysis using InterMine.
Lyne R, Sullivan J, Butano D, Contrino S, Heimbach J, Hu F, Kalderimis A, Lyne M, Smith RN, Štěpán R, Balakrishnan R, Binkley G, Harris T, Karra K, Moxon SA, Motenko H, Neuhauser S, Ruzicka L, Cherry M, Richardson J, Stein L, Westerfield M, Worthey E, Micklem G. Lyne R, et al. Genesis. 2015 Aug;53(8):547-60. doi: 10.1002/dvg.22869. Epub 2015 Jul 8. Genesis. 2015. PMID: 26097192 Free PMC article. Review.
Big data and other challenges in the quest for orthologs.
Sonnhammer EL, Gabaldón T, Sousa da Silva AW, Martin M, Robinson-Rechavi M, Boeckmann B, Thomas PD, Dessimoz C; Quest for Orthologs consortium. Sonnhammer EL, et al. Bioinformatics. 2014 Nov 1;30(21):2993-8. doi: 10.1093/bioinformatics/btu492. Epub 2014 Jul 26. Bioinformatics. 2014. PMID: 25064571 Free PMC article.
33 results