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Bacterial enrichment prior to third-generation metagenomic sequencing improves detection of BRD pathogens and genetic determinants of antimicrobial resistance in feedlot cattle.
Herman EK, Lacoste SR, Freeman CN, Otto SJG, McCarthy EL, Links MG, Stothard P, Waldner CL. Herman EK, et al. Among authors: otto sjg. Front Microbiol. 2024 May 8;15:1386319. doi: 10.3389/fmicb.2024.1386319. eCollection 2024. Front Microbiol. 2024. PMID: 38779502 Free PMC article.
The Canadian VirusSeq Data Portal & Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology.
Gill EE, Jia B, Murall CL, Poujol R, Anwar MZ, John NS, Richardsson J, Hobb A, Olabode AS, Lepsa A, Duggan AT, Tyler AD, N'Guessan A, Kachru A, Chan B, Yoshida C, Yung CK, Bujold D, Andric D, Su E, Griffiths EJ, Domselaar GV, Jolly GW, Ward HKE, Feher H, Baker J, Simpson JT, Uddin J, Ragoussis J, Eubank J, Fritz JH, Gálvez JH, Fang K, Cullion K, Rivera L, Xiang L, Croxen MA, Shiell M, Prystajecky N, Quirion PO, Bajari R, Rich S, Mubareka S, Moreira S, Cain S, Sutcliffe SG, Kraemer SA, Joly Y, Alturmessov Y, Consortium C, Consortium C, Academic VDP, Network H, Fiume M, Snutch TP, Bell C, Lopez-Correa C, Hussin JG, Joy JB, Colijn C, Gordon PMK, Hsiao WWL, Poon AFY, Knox NC, Courtot M, Stein L, Otto SP, Bourque G, Shapiro BJ, Brinkman FSL. Gill EE, et al. Among authors: otto sp. ArXiv [Preprint]. 2024 May 8:arXiv:2405.04734v1. ArXiv. 2024. PMID: 38764594 Free PMC article. Preprint.
The prokaryotic and eukaryotic microbiome of Pacific oyster spat is shaped by ocean warming but not acidification.
Zhong KX, Chan AM, Collicutt B, Daspe M, Finke JF, Foss M, Green TJ, Harley CDG, Hesketh AV, Miller KM, Otto SP, Rolheiser K, Saunders R, Sutherland BJG, Suttle CA. Zhong KX, et al. Among authors: otto sp. Appl Environ Microbiol. 2024 Apr 17;90(4):e0005224. doi: 10.1128/aem.00052-24. Epub 2024 Mar 11. Appl Environ Microbiol. 2024. PMID: 38466091
1,152 results