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Environmental metabolomics characterization of modern stromatolites and annotation of ibhayipeptolides.
Neuhaus GF, Aron AT, Isemonger EW, Petras D, Waterworth SC, Madonsela LS, Gentry EC, Siwe Noundou X, Kalinski JJ, Polyzois A, Habiyaremye JC, Redick MA, Kwan JC, Dorrington RA, Dorrestein PC, McPhail KL. Neuhaus GF, et al. Among authors: petras d. PLoS One. 2024 May 23;19(5):e0303273. doi: 10.1371/journal.pone.0303273. eCollection 2024. PLoS One. 2024. PMID: 38781236 Free PMC article.
Reproducible mass spectrometry data processing and compound annotation in MZmine 3.
Heuckeroth S, Damiani T, Smirnov A, Mokshyna O, Brungs C, Korf A, Smith JD, Stincone P, Dreolin N, Nothias LF, Hyötyläinen T, Orešič M, Karst U, Dorrestein PC, Petras D, Du X, van der Hooft JJJ, Schmid R, Pluskal T. Heuckeroth S, et al. Among authors: petras d. Nat Protoc. 2024 May 20. doi: 10.1038/s41596-024-00996-y. Online ahead of print. Nat Protoc. 2024. PMID: 38769143 Review.
Assessing Target Specificity of the Small Molecule Inhibitor MARIMASTAT to Snake Venom Toxins: A Novel Application of Thermal Proteome Profiling.
Smith CF, Modahl CM, Ceja Galindo D, Larson KY, Maroney SP, Bahrabadi L, Brandehoff NP, Perry BW, McCabe MC, Petras D, Lomonte B, Calvete JJ, Castoe TA, Mackessy SP, Hansen KC, Saviola AJ. Smith CF, et al. Among authors: petras d. Mol Cell Proteomics. 2024 Apr 27;23(6):100779. doi: 10.1016/j.mcpro.2024.100779. Online ahead of print. Mol Cell Proteomics. 2024. PMID: 38679388 Free article.
Renal Congestion in Heart Failure: Insights in Novel Diagnostic Modalities.
Dimitriadis K, Damianaki A, Bletsa E, Pyrpyris N, Tsioufis P, Theofilis P, Beneki E, Tatakis F, Kasiakogias A, Oikonomou E, Petras D, Siasos G, Aggeli K, Tsioufis K. Dimitriadis K, et al. Among authors: petras d. Cardiol Rev. 2024 Feb 29. doi: 10.1097/CRD.0000000000000673. Online ahead of print. Cardiol Rev. 2024. PMID: 38427026
microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Zuffa S, Schmid R, Bauermeister A, P Gomes PW, Caraballo-Rodriguez AM, El Abiead Y, Aron AT, Gentry EC, Zemlin J, Meehan MJ, Avalon NE, Cichewicz RH, Buzun E, Terrazas MC, Hsu CY, Oles R, Ayala AV, Zhao J, Chu H, Kuijpers MCM, Jackrel SL, Tugizimana F, Nephali LP, Dubery IA, Madala NE, Moreira EA, Costa-Lotufo LV, Lopes NP, Rezende-Teixeira P, Jimenez PC, Rimal B, Patterson AD, Traxler MF, Pessotti RC, Alvarado-Villalobos D, Tamayo-Castillo G, Chaverri P, Escudero-Leyva E, Quiros-Guerrero LM, Bory AJ, Joubert J, Rutz A, Wolfender JL, Allard PM, Sichert A, Pontrelli S, Pullman BS, Bandeira N, Gerwick WH, Gindro K, Massana-Codina J, Wagner BC, Forchhammer K, Petras D, Aiosa N, Garg N, Liebeke M, Bourceau P, Kang KB, Gadhavi H, de Carvalho LPS, Silva Dos Santos M, Pérez-Lorente AI, Molina-Santiago C, Romero D, Franke R, Brönstrup M, Vera Ponce de León A, Pope PB, La Rosa SL, La Barbera G, Roager HM, Laursen MF, Hammerle F, Siewert B, Peintner U, Licona-Cassani C, Rodriguez-Orduña L, Rampler E, Hildebrand F, Koellensperger G, Schoeny H, Hohenwallner K, Panzenboeck L, Gregor R, O'Neill EC, Roxborough ET, Odoi J, Bale NJ, Ding S, Sinninghe Damsté JS, Guan XL, Cui JJ, Ju KS, Silva… See abstract for full author list ➔ Zuffa S, et al. Among authors: petras d. Nat Microbiol. 2024 Feb;9(2):336-345. doi: 10.1038/s41564-023-01575-9. Epub 2024 Feb 5. Nat Microbiol. 2024. PMID: 38316926 Free PMC article.
148 results