Serra A - Search Results

1

Advancing chemical safety assessment through an omics-based characterization of the test system-chemical interaction.

Del Giudice G, Migliaccio G, D'Alessandro N, Saarimäki LA, Torres Maia M, Annala ME, Leppänen J, Mӧbus L, Pavel A, Vaani M, Vallius A, Ylä-Outinen L, Greco D, Serra A. Del Giudice G, et al. Among authors: serra a. Front Toxicol. 2023 Nov 9;5:1294780. doi: 10.3389/ftox.2023.1294780. eCollection 2023. Front Toxicol. 2023. PMID: 38026842 Free PMC article.

2

Microarray Data Preprocessing: From Experimental Design to Differential Analysis.

Federico A, Saarimäki LA, Serra A, Del Giudice G, Kinaret PAS, Scala G, Greco D. Federico A, et al. Among authors: serra a. Methods Mol Biol. 2022;2401:79-100. doi: 10.1007/978-1-0716-1839-4_7. Methods Mol Biol. 2022. PMID: 34902124

3

The potential of a data centred approach & knowledge graph data representation in chemical safety and drug design.

Pavel A, Saarimäki LA, Möbus L, Federico A, Serra A, Greco D. Pavel A, et al. Among authors: serra a. Comput Struct Biotechnol J. 2022 Sep 5;20:4837-4849. doi: 10.1016/j.csbj.2022.08.061. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 36147662 Free PMC article. Review.

4

Toxicogenomics Data for Chemical Safety Assessment and Development of New Approach Methodologies: An Adverse Outcome Pathway-Based Approach.

Saarimäki LA, Morikka J, Pavel A, Korpilähde S, Del Giudice G, Federico A, Fratello M, Serra A, Greco D. Saarimäki LA, et al. Among authors: serra a. Adv Sci (Weinh). 2023 Jan;10(2):e2203984. doi: 10.1002/advs.202203984. Epub 2022 Dec 7. Adv Sci (Weinh). 2023. PMID: 36479815 Free PMC article.

5

A curated gene and biological system annotation of adverse outcome pathways related to human health.

Saarimäki LA, Fratello M, Pavel A, Korpilähde S, Leppänen J, Serra A, Greco D. Saarimäki LA, et al. Among authors: serra a. Sci Data. 2023 Jun 24;10(1):409. doi: 10.1038/s41597-023-02321-w. Sci Data. 2023. PMID: 37355733 Free PMC article.

6

DREAM: an R package for druggability evaluation of human complex diseases.

Federico A, Fratello M, Pavel A, Möbus L, Del Giudice G, Serra A, Greco D. Federico A, et al. Among authors: serra a. Bioinformatics. 2023 Jul 1;39(7):btad442. doi: 10.1093/bioinformatics/btad442. Bioinformatics. 2023. PMID: 37471593 Free PMC article.

7

BMDx: a graphical Shiny application to perform Benchmark Dose analysis for transcriptomics data.

Serra A, Saarimäki LA, Fratello M, Marwah VS, Greco D. Serra A, et al. Bioinformatics. 2020 May 1;36(9):2932-2933. doi: 10.1093/bioinformatics/btaa030. Bioinformatics. 2020. PMID: 31950985

8

TinderMIX: Time-dose integrated modelling of toxicogenomics data.

Serra A, Fratello M, Del Giudice G, Saarimäki LA, Paci M, Federico A, Greco D. Serra A, et al. Gigascience. 2020 May 1;9(5):giaa055. doi: 10.1093/gigascience/giaa055. Gigascience. 2020. PMID: 32449777 Free PMC article.

9

Integrated network analysis reveals new genes suggesting COVID-19 chronic effects and treatment.

Pavel A, Del Giudice G, Federico A, Di Lieto A, Kinaret PAS, Serra A, Greco D. Pavel A, et al. Among authors: serra a. Brief Bioinform. 2021 Mar 22;22(2):1430-1441. doi: 10.1093/bib/bbaa417. Brief Bioinform. 2021. PMID: 33569598 Free PMC article.

10

VOLTA: adVanced mOLecular neTwork Analysis.

Pavel A, Federico A, Del Giudice G, Serra A, Greco D. Pavel A, et al. Among authors: serra a. Bioinformatics. 2021 Dec 7;37(23):4587-4588. doi: 10.1093/bioinformatics/btab642. Bioinformatics. 2021. PMID: 34498028 Free PMC article.

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