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Genomic characterization of IDH-mutant astrocytoma progression to grade 4 in the treatment setting.
Rautajoki KJ, Jaatinen S, Hartewig A, Tiihonen AM, Annala M, Salonen I, Valkonen M, Simola V, Vuorinen EM, Kivinen A, Rauhala MJ, Nurminen R, Maass KK, Lahtela SL, Jukkola A, Yli-Harja O, Helén P, Pajtler KW, Ruusuvuori P, Haapasalo J, Zhang W, Haapasalo H, Nykter M. Rautajoki KJ, et al. Among authors: nykter m. Acta Neuropathol Commun. 2023 Nov 6;11(1):176. doi: 10.1186/s40478-023-01669-9. Acta Neuropathol Commun. 2023. PMID: 37932833 Free PMC article.
RNA Polymerase III Subunit POLR3G Regulates Specific Subsets of PolyA+ and SmallRNA Transcriptomes and Splicing in Human Pluripotent Stem Cells.
Lund RJ, Rahkonen N, Malonzo M, Kauko L, Emani MR, Kivinen V, Närvä E, Kemppainen E, Laiho A, Skottman H, Hovatta O, Rasool O, Nykter M, Lähdesmäki H, Lahesmaa R. Lund RJ, et al. Among authors: nykter m. Stem Cell Reports. 2017 May 9;8(5):1442-1454. doi: 10.1016/j.stemcr.2017.04.016. Stem Cell Reports. 2017. PMID: 28494942 Free PMC article.
Critical assessment of automated flow cytometry data analysis techniques.
Aghaeepour N, Finak G; FlowCAP Consortium; DREAM Consortium; Hoos H, Mosmann TR, Brinkman R, Gottardo R, Scheuermann RH. Aghaeepour N, et al. Nat Methods. 2013 Mar;10(3):228-38. doi: 10.1038/nmeth.2365. Epub 2013 Feb 10. Nat Methods. 2013. PMID: 23396282 Free PMC article.
Simulation of microarray data with realistic characteristics.
Nykter M, Aho T, Ahdesmäki M, Ruusuvuori P, Lehmussola A, Yli-Harja O. Nykter M, et al. BMC Bioinformatics. 2006 Jul 18;7:349. doi: 10.1186/1471-2105-7-349. BMC Bioinformatics. 2006. PMID: 16848902 Free PMC article.
Microarray simulator as educational tool.
Ruusuvuori P, Nykter M, Mäkiraatikka E, Lehmussola A, Korpelainen T, Erkkilä T, Yli-Harja O. Ruusuvuori P, et al. Among authors: nykter m. Annu Int Conf IEEE Eng Med Biol Soc. 2007;2007:5920-3. doi: 10.1109/IEMBS.2007.4353695. Annu Int Conf IEEE Eng Med Biol Soc. 2007. PMID: 18003361
Gene expression dynamics in the macrophage exhibit criticality.
Nykter M, Price ND, Aldana M, Ramsey SA, Kauffman SA, Hood LE, Yli-Harja O, Shmulevich I. Nykter M, et al. Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):1897-900. doi: 10.1073/pnas.0711525105. Epub 2008 Feb 4. Proc Natl Acad Sci U S A. 2008. PMID: 18250330 Free PMC article.
167 results