Staaf J - Search Results

1

Perturbation and stability of PAM50 subtyping in population-based primary invasive breast cancer.

Veerla S, Hohmann L, Nacer DF, Vallon-Christersson J, Staaf J. Veerla S, et al. Among authors: staaf j. NPJ Breast Cancer. 2023 Oct 19;9(1):83. doi: 10.1038/s41523-023-00589-0. NPJ Breast Cancer. 2023. PMID: 37857634 Free PMC article.

2

ACID: a database for microarray clone information.

Ringnér M, Veerla S, Andersson S, Staaf J, Häkkinen J. Ringnér M, et al. Among authors: staaf j. Bioinformatics. 2004 Sep 22;20(14):2305-6. doi: 10.1093/bioinformatics/bth089. Epub 2004 Feb 12. Bioinformatics. 2004. PMID: 14962935

3

Distinct genomic profiles in hereditary breast tumors identified by array-based comparative genomic hybridization.

Jönsson G, Naylor TL, Vallon-Christersson J, Staaf J, Huang J, Ward MR, Greshock JD, Luts L, Olsson H, Rahman N, Stratton M, Ringnér M, Borg A, Weber BL. Jönsson G, et al. Among authors: staaf j. Cancer Res. 2005 Sep 1;65(17):7612-21. doi: 10.1158/0008-5472.CAN-05-0570. Cancer Res. 2005. PMID: 16140926

4

High-resolution genomic profiles of breast cancer cell lines assessed by tiling BAC array comparative genomic hybridization.

Jönsson G, Staaf J, Olsson E, Heidenblad M, Vallon-Christersson J, Osoegawa K, de Jong P, Oredsson S, Ringnér M, Höglund M, Borg A. Jönsson G, et al. Among authors: staaf j. Genes Chromosomes Cancer. 2007 Jun;46(6):543-58. doi: 10.1002/gcc.20438. Genes Chromosomes Cancer. 2007. PMID: 17334996

5

Non-coding antisense transcription detected by conventional and single-stranded cDNA microarray.

Vallon-Christersson J, Staaf J, Kvist A, Medstrand P, Borg A, Rovira C. Vallon-Christersson J, et al. Among authors: staaf j. BMC Genomics. 2007 Aug 29;8:295. doi: 10.1186/1471-2164-8-295. BMC Genomics. 2007. PMID: 17727707 Free PMC article.

6

Normalization of array-CGH data: influence of copy number imbalances.

Staaf J, Jönsson G, Ringnér M, Vallon-Christersson J. Staaf J, et al. BMC Genomics. 2007 Oct 22;8:382. doi: 10.1186/1471-2164-8-382. BMC Genomics. 2007. PMID: 17953745 Free PMC article.

7

Recurrent gross mutations of the PTEN tumor suppressor gene in breast cancers with deficient DSB repair.

Saal LH, Gruvberger-Saal SK, Persson C, Lövgren K, Jumppanen M, Staaf J, Jönsson G, Pires MM, Maurer M, Holm K, Koujak S, Subramaniyam S, Vallon-Christersson J, Olsson H, Su T, Memeo L, Ludwig T, Ethier SP, Krogh M, Szabolcs M, Murty VV, Isola J, Hibshoosh H, Parsons R, Borg A. Saal LH, et al. Among authors: staaf j. Nat Genet. 2008 Jan;40(1):102-7. doi: 10.1038/ng.2007.39. Epub 2007 Dec 9. Nat Genet. 2008. PMID: 18066063 Free PMC article.

8

Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays.

Staaf J, Lindgren D, Vallon-Christersson J, Isaksson A, Göransson H, Juliusson G, Rosenquist R, Höglund M, Borg A, Ringnér M. Staaf J, et al. Genome Biol. 2008;9(9):R136. doi: 10.1186/gb-2008-9-9-r136. Epub 2008 Sep 16. Genome Biol. 2008. PMID: 18796136 Free PMC article.

9

Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios.

Staaf J, Vallon-Christersson J, Lindgren D, Juliusson G, Rosenquist R, Höglund M, Borg A, Ringnér M. Staaf J, et al. BMC Bioinformatics. 2008 Oct 2;9:409. doi: 10.1186/1471-2105-9-409. BMC Bioinformatics. 2008. PMID: 18831757 Free PMC article.

10

MiRNA expression in urothelial carcinomas: important roles of miR-10a, miR-222, miR-125b, miR-7 and miR-452 for tumor stage and metastasis, and frequent homozygous losses of miR-31.

Veerla S, Lindgren D, Kvist A, Frigyesi A, Staaf J, Persson H, Liedberg F, Chebil G, Gudjonsson S, Borg A, Månsson W, Rovira C, Höglund M. Veerla S, et al. Among authors: staaf j. Int J Cancer. 2009 May 1;124(9):2236-42. doi: 10.1002/ijc.24183. Int J Cancer. 2009. PMID: 19127597 Free article.

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