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Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients.
Nat Commun. 2023 Sep 25;14(1):5982. doi: 10.1038/s41467-023-41670-3.
Nat Commun. 2023.
PMID: 37749078
Free PMC article.
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data.
Ramazzotti D, Graudenzi A, De Sano L, Antoniotti M, Caravagna G.
Ramazzotti D, et al. Among authors: de sano l.
BMC Bioinformatics. 2019 Apr 25;20(1):210. doi: 10.1186/s12859-019-2795-4.
BMC Bioinformatics. 2019.
PMID: 31023236
Free PMC article.
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SIMLR: A Tool for Large-Scale Genomic Analyses by Multi-Kernel Learning.
Wang B, Ramazzotti D, De Sano L, Zhu J, Pierson E, Batzoglou S.
Wang B, et al. Among authors: de sano l.
Proteomics. 2018 Jan;18(2). doi: 10.1002/pmic.201700232.
Proteomics. 2018.
PMID: 29265724
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Erratum: OncoScore: a novel, Internet-based tool to assess the oncogenic potential of genes.
Piazza R, Ramazzotti D, Spinelli R, Pirola A, De Sano L, Ferrari P, Magistroni V, Cordani N, Sharma N, Gambacorti-Passerini C.
Piazza R, et al. Among authors: de sano l.
Sci Rep. 2017 May 22;7:46823. doi: 10.1038/srep46823.
Sci Rep. 2017.
PMID: 28530230
Free PMC article.
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OncoScore: a novel, Internet-based tool to assess the oncogenic potential of genes.
Piazza R, Ramazzotti D, Spinelli R, Pirola A, De Sano L, Ferrari P, Magistroni V, Cordani N, Sharma N, Gambacorti-Passerini C.
Piazza R, et al. Among authors: de sano l.
Sci Rep. 2017 Apr 7;7:46290. doi: 10.1038/srep46290.
Sci Rep. 2017.
PMID: 28387367
Free PMC article.
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Algorithmic methods to infer the evolutionary trajectories in cancer progression.
Caravagna G, Graudenzi A, Ramazzotti D, Sanz-Pamplona R, De Sano L, Mauri G, Moreno V, Antoniotti M, Mishra B.
Caravagna G, et al. Among authors: de sano l.
Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):E4025-34. doi: 10.1073/pnas.1520213113. Epub 2016 Jun 28.
Proc Natl Acad Sci U S A. 2016.
PMID: 27357673
Free PMC article.
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TRONCO: an R package for the inference of cancer progression models from heterogeneous genomic data.
De Sano L, Caravagna G, Ramazzotti D, Graudenzi A, Mauri G, Mishra B, Antoniotti M.
De Sano L, et al.
Bioinformatics. 2016 Jun 15;32(12):1911-3. doi: 10.1093/bioinformatics/btw035. Epub 2016 Feb 9.
Bioinformatics. 2016.
PMID: 26861821
Free PMC article.
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Automatising the analysis of stochastic biochemical time-series.
Caravagna G, De Sano L, Antoniotti M.
Caravagna G, et al. Among authors: de sano l.
BMC Bioinformatics. 2015;16 Suppl 9(Suppl 9):S8. doi: 10.1186/1471-2105-16-S9-S8. Epub 2015 Jun 1.
BMC Bioinformatics. 2015.
PMID: 26051821
Free PMC article.
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