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Last year at Marienbad: Unusual nucleic acid structures.
Mergny JL, Trantírek L, Capranico G. Mergny JL, et al. Among authors: trantirek l. Biochimie. 2023 Nov;214(Pt A):1-4. doi: 10.1016/j.biochi.2023.09.022. Epub 2023 Sep 23. Biochimie. 2023. PMID: 37748749 No abstract available.
Evaluation of the Stability of DNA i-Motifs in the Nuclei of Living Mammalian Cells.
Dzatko S, Krafcikova M, Hänsel-Hertsch R, Fessl T, Fiala R, Loja T, Krafcik D, Mergny JL, Foldynova-Trantirkova S, Trantirek L. Dzatko S, et al. Among authors: trantirek l. Angew Chem Int Ed Engl. 2018 Feb 19;57(8):2165-2169. doi: 10.1002/anie.201712284. Epub 2018 Jan 29. Angew Chem Int Ed Engl. 2018. PMID: 29266664 Free PMC article.
Monitoring DNA-Ligand Interactions in Living Human Cells Using NMR Spectroscopy.
Krafcikova M, Dzatko S, Caron C, Granzhan A, Fiala R, Loja T, Teulade-Fichou MP, Fessl T, Hänsel-Hertsch R, Mergny JL, Foldynova-Trantirkova S, Trantirek L. Krafcikova M, et al. Among authors: trantirek l. J Am Chem Soc. 2019 Aug 28;141(34):13281-13285. doi: 10.1021/jacs.9b03031. Epub 2019 Aug 14. J Am Chem Soc. 2019. PMID: 31394899 Free article.
Composite 5-methylations of cytosines modulate i-motif stability in a sequence-specific manner: Implications for DNA nanotechnology and epigenetic regulation of plant telomeric DNA.
Školáková P, Badri Z, Foldynová-Trantírková S, Ryneš J, Šponer J, Fojtová M, Fajkus J, Marek R, Vorlíčková M, Mergny JL, Trantírek L. Školáková P, et al. Among authors: trantirek l. Biochim Biophys Acta Gen Subj. 2020 Sep;1864(9):129651. doi: 10.1016/j.bbagen.2020.129651. Epub 2020 May 31. Biochim Biophys Acta Gen Subj. 2020. PMID: 32492502
DNA i-motif formation at neutral pH is driven by kinetic partitioning.
Školáková P, Gajarský M, Palacký J, Šubert D, Renčiuk D, Trantírek L, Mergny JL, Vorlíčková M. Školáková P, et al. Among authors: trantirek l. Nucleic Acids Res. 2023 Apr 11;51(6):2950-2962. doi: 10.1093/nar/gkad119. Nucleic Acids Res. 2023. PMID: 36912102 Free PMC article.
A sodium/potassium switch for G4-prone G/C-rich sequences.
Luo Y, Živković ML, Wang J, Ryneš J, Foldynová-Trantírková S, Trantírek L, Verga D, Mergny JL. Luo Y, et al. Among authors: trantirek l. Nucleic Acids Res. 2024 Jan 11;52(1):448-461. doi: 10.1093/nar/gkad1073. Nucleic Acids Res. 2024. PMID: 37986223 Free PMC article.
DNA Quadruplex Structure with a Unique Cation Dependency.
Gajarsky M, Stadlbauer P, Sponer J, Cucchiarini A, Dobrovolna M, Brazda V, Mergny JL, Trantirek L, Lenarcic Zivkovic M. Gajarsky M, et al. Among authors: trantirek l. Angew Chem Int Ed Engl. 2024 Feb 12;63(7):e202313226. doi: 10.1002/anie.202313226. Epub 2024 Jan 15. Angew Chem Int Ed Engl. 2024. PMID: 38143239
In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells.
Víšková P, Ištvánková E, Ryneš J, Džatko Š, Loja T, Živković ML, Rigo R, El-Khoury R, Serrano-Chacón I, Damha MJ, González C, Mergny JL, Foldynová-Trantírková S, Trantírek L. Víšková P, et al. Among authors: trantirek l. Nat Commun. 2024 Mar 5;15(1):1992. doi: 10.1038/s41467-024-46221-y. Nat Commun. 2024. PMID: 38443388 Free PMC article.
79 results