Shi L - Search Results

1

Prediction of base editor off-targets by deep learning.

Zhang C, Yang Y, Qi T, Zhang Y, Hou L, Wei J, Yang J, Shi L, Ong SG, Wang H, Wang H, Yu B, Wang Y. Zhang C, et al. Among authors: shi l. Nat Commun. 2023 Sep 2;14(1):5358. doi: 10.1038/s41467-023-41004-3. Nat Commun. 2023. PMID: 37660097 Free PMC article.

2

PreMedKB: an integrated precision medicine knowledgebase for interpreting relationships between diseases, genes, variants and drugs.

Yu Y, Wang Y, Xia Z, Zhang X, Jin K, Yang J, Ren L, Zhou Z, Yu D, Qing T, Zhang C, Jin L, Zheng Y, Guo L, Shi L. Yu Y, et al. Among authors: shi l. Nucleic Acids Res. 2019 Jan 8;47(D1):D1090-D1101. doi: 10.1093/nar/gky1042. Nucleic Acids Res. 2019. PMID: 30407536 Free PMC article.

3

MicroRNA-302d promotes the proliferation of human pluripotent stem cell-derived cardiomyocytes by inhibiting LATS2 in the Hippo pathway.

Xu F, Yang J, Shang J, Lan F, Li M, Shi L, Shen L, Wang Y, Ge J. Xu F, et al. Among authors: shi l. Clin Sci (Lond). 2019 Jul 2;133(13):1387-1399. doi: 10.1042/CS20190099. Print 2019 Jul 15. Clin Sci (Lond). 2019. PMID: 31239293

4

Optimized CRISPR guide RNA design for two high-fidelity Cas9 variants by deep learning.

Wang D, Zhang C, Wang B, Li B, Wang Q, Liu D, Wang H, Zhou Y, Shi L, Lan F, Wang Y. Wang D, et al. Among authors: shi l. Nat Commun. 2019 Sep 19;10(1):4284. doi: 10.1038/s41467-019-12281-8. Nat Commun. 2019. PMID: 31537810 Free PMC article.

5

ECCDIA: an interactive web tool for the comprehensive analysis of clinical and survival data of esophageal cancer patients.

Yang J, Shang J, Song Q, Yang Z, Chen J, Yu Y, Shi L. Yang J, et al. Among authors: shi l. BMC Cancer. 2020 Oct 12;20(1):985. doi: 10.1186/s12885-020-07479-9. BMC Cancer. 2020. PMID: 33046018 Free PMC article.

6

BioVisReport: A Markdown-based lightweight website builder for reproducible and interactive visualization of results from peer-reviewed publications.

Yang J, Liu Y, Shang J, Huang Y, Yu Y, Li Z, Shi L, Ran Z. Yang J, et al. Among authors: shi l. Comput Struct Biotechnol J. 2022 Jun 8;20:3133-3139. doi: 10.1016/j.csbj.2022.06.009. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35782729 Free PMC article.

7

Integrated multiomic profiling of breast cancer in the Chinese population reveals patient stratification and therapeutic vulnerabilities.

Jiang YZ, Ma D, Jin X, Xiao Y, Yu Y, Shi J, Zhou YF, Fu T, Lin CJ, Dai LJ, Liu CL, Zhao S, Su GH, Hou W, Liu Y, Chen Q, Yang J, Zhang N, Zhang WJ, Liu W, Ge W, Yang WT, You C, Gu Y, Kaklamani V, Bertucci F, Verschraegen C, Daemen A, Shah NM, Wang T, Guo T, Shi L, Perou CM, Zheng Y, Huang W, Shao ZM. Jiang YZ, et al. Among authors: shi l, shi j. Nat Cancer. 2024 Apr;5(4):673-690. doi: 10.1038/s43018-024-00725-0. Epub 2024 Feb 12. Nat Cancer. 2024. PMID: 38347143

8

A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages.

Yu Y, Fuscoe JC, Zhao C, Guo C, Jia M, Qing T, Bannon DI, Lancashire L, Bao W, Du T, Luo H, Su Z, Jones WD, Moland CL, Branham WS, Qian F, Ning B, Li Y, Hong H, Guo L, Mei N, Shi T, Wang KY, Wolfinger RD, Nikolsky Y, Walker SJ, Duerksen-Hughes P, Mason CE, Tong W, Thierry-Mieg J, Thierry-Mieg D, Shi L, Wang C. Yu Y, et al. Among authors: shi l, shi t. Nat Commun. 2014;5:3230. doi: 10.1038/ncomms4230. Nat Commun. 2014. PMID: 24510058 Free PMC article.

9

Dynamic transcriptomes identify biogenic amines and insect-like hormonal regulation for mediating reproduction in Schistosoma japonicum.

Wang J, Yu Y, Shen H, Qing T, Zheng Y, Li Q, Mo X, Wang S, Li N, Chai R, Xu B, Liu M, Brindley PJ, McManus DP, Feng Z, Shi L, Hu W. Wang J, et al. Among authors: shi l. Nat Commun. 2017 Mar 13;8:14693. doi: 10.1038/ncomms14693. Nat Commun. 2017. PMID: 28287085 Free PMC article.

10

The long noncoding RNA lncNB1 promotes tumorigenesis by interacting with ribosomal protein RPL35.

Liu PY, Tee AE, Milazzo G, Hannan KM, Maag J, Mondal S, Atmadibrata B, Bartonicek N, Peng H, Ho N, Mayoh C, Ciaccio R, Sun Y, Henderson MJ, Gao J, Everaert C, Hulme AJ, Wong M, Lan Q, Cheung BB, Shi L, Wang JY, Simon T, Fischer M, Zhang XD, Marshall GM, Norris MD, Haber M, Vandesompele J, Li J, Mestdagh P, Hannan RD, Dinger ME, Perini G, Liu T. Liu PY, et al. Among authors: shi l. Nat Commun. 2019 Nov 5;10(1):5026. doi: 10.1038/s41467-019-12971-3. Nat Commun. 2019. PMID: 31690716 Free PMC article.

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