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Molecular characterization and descriptive analysis of carbapenemase-producing Gram-negative rod infections in Bogota, Colombia.
Microbiol Spectr. 2024 Jun 4;12(6):e0171423. doi: 10.1128/spectrum.01714-23. Epub 2024 Apr 17.
Microbiol Spectr. 2024.
PMID: 38629835
Free article.
Genomic investigation of multispecies and multivariant blaNDM outbreak reveals key role of horizontal plasmid transmission.
Macesic N, Dennis A, Hawkey J, Vezina B, Wisniewski JA, Cottingham H, Blakeway LV, Harshegyi T, Pragastis K, Badoordeen GZ, Bass P, Stewardson AJ, Dennison A, Spelman DW, Jenney AWJ, Peleg AY.
Macesic N, et al. Among authors: harshegyi t.
Infect Control Hosp Epidemiol. 2024 Jun;45(6):709-716. doi: 10.1017/ice.2024.8. Epub 2024 Feb 12.
Infect Control Hosp Epidemiol. 2024.
PMID: 38344902
Free PMC article.
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Genomic dissection of endemic carbapenem resistance reveals metallo-beta-lactamase dissemination through clonal, plasmid and integron transfer.
Macesic N, Hawkey J, Vezina B, Wisniewski JA, Cottingham H, Blakeway LV, Harshegyi T, Pragastis K, Badoordeen GZ, Dennison A, Spelman DW, Jenney AWJ, Peleg AY.
Macesic N, et al. Among authors: harshegyi t.
Nat Commun. 2023 Aug 8;14(1):4764. doi: 10.1038/s41467-023-39915-2.
Nat Commun. 2023.
PMID: 37553339
Free PMC article.
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Direct inference and control of genetic population structure from RNA sequencing data.
Fachrul M, Karkey A, Shakya M, Judd LM, Harshegyi T, Sim KS, Tonks S, Dongol S, Shrestha R, Salim A; STRATAA study group; Baker S, Pollard AJ, Khor CC, Dolecek C, Basnyat B, Dunstan SJ, Holt KE, Inouye M.
Fachrul M, et al. Among authors: harshegyi t.
Commun Biol. 2023 Aug 2;6(1):804. doi: 10.1038/s42003-023-05171-9.
Commun Biol. 2023.
PMID: 37532769
Free PMC article.
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ESBL plasmids in Klebsiella pneumoniae: diversity, transmission and contribution to infection burden in the hospital setting.
Hawkey J, Wyres KL, Judd LM, Harshegyi T, Blakeway L, Wick RR, Jenney AWJ, Holt KE.
Hawkey J, et al. Among authors: harshegyi t.
Genome Med. 2022 Aug 23;14(1):97. doi: 10.1186/s13073-022-01103-0.
Genome Med. 2022.
PMID: 35999578
Free PMC article.
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A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality.
Hawkey J, Vezina B, Monk JM, Judd LM, Harshegyi T, López-Fernández S, Rodrigues C, Brisse S, Holt KE, Wyres KL.
Hawkey J, et al. Among authors: harshegyi t.
Genome Res. 2022 May;32(5):1004-1014. doi: 10.1101/gr.276289.121. Epub 2022 Mar 11.
Genome Res. 2022.
PMID: 35277433
Free PMC article.
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Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry.
Bridel S, Watts SC, Judd LM, Harshegyi T, Passet V, Rodrigues C, Holt KE, Brisse S.
Bridel S, et al. Among authors: harshegyi t.
Res Microbiol. 2021 Jun-Aug;172(4-5):103835. doi: 10.1016/j.resmic.2021.103835. Epub 2021 May 15.
Res Microbiol. 2021.
PMID: 34004273
Free article.
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