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sccomp: Robust differential composition and variability analysis for single-cell data.
Mangiola S, Roth-Schulze AJ, Trussart M, Zozaya-Valdés E, Ma M, Gao Z, Rubin AF, Speed TP, Shim H, Papenfuss AT. Mangiola S, et al. Among authors: papenfuss at. Proc Natl Acad Sci U S A. 2023 Aug 15;120(33):e2203828120. doi: 10.1073/pnas.2203828120. Epub 2023 Aug 7. Proc Natl Acad Sci U S A. 2023. PMID: 37549298 Free PMC article.
Regulation of apicomplexan actin-based motility.
Baum J, Papenfuss AT, Baum B, Speed TP, Cowman AF. Baum J, et al. Among authors: papenfuss at. Nat Rev Microbiol. 2006 Aug;4(8):621-8. doi: 10.1038/nrmicro1465. Nat Rev Microbiol. 2006. PMID: 16845432 Review.
BET inhibitor resistance emerges from leukaemia stem cells.
Fong CY, Gilan O, Lam EY, Rubin AF, Ftouni S, Tyler D, Stanley K, Sinha D, Yeh P, Morison J, Giotopoulos G, Lugo D, Jeffrey P, Lee SC, Carpenter C, Gregory R, Ramsay RG, Lane SW, Abdel-Wahab O, Kouzarides T, Johnstone RW, Dawson SJ, Huntly BJ, Prinjha RK, Papenfuss AT, Dawson MA. Fong CY, et al. Among authors: papenfuss at. Nature. 2015 Sep 24;525(7570):538-42. doi: 10.1038/nature14888. Epub 2015 Sep 14. Nature. 2015. PMID: 26367796 Free PMC article.
A statistical framework for analyzing deep mutational scanning data.
Rubin AF, Gelman H, Lucas N, Bajjalieh SM, Papenfuss AT, Speed TP, Fowler DM. Rubin AF, et al. Among authors: papenfuss at. Genome Biol. 2017 Aug 7;18(1):150. doi: 10.1186/s13059-017-1272-5. Genome Biol. 2017. PMID: 28784151 Free PMC article.
Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis.
Penington JS, Penno MAS, Ngui KM, Ajami NJ, Roth-Schulze AJ, Wilcox SA, Bandala-Sanchez E, Wentworth JM, Barry SC, Brown CY, Couper JJ, Petrosino JF, Papenfuss AT, Harrison LC; ENDIA Study Group*. Penington JS, et al. Among authors: papenfuss at. Sci Rep. 2018 Mar 12;8(1):4386. doi: 10.1038/s41598-018-22491-7. Sci Rep. 2018. PMID: 29531234 Free PMC article.
184 results