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Results of the 2020 Genomic Proficiency Test for the network of European Union Reference Laboratory for Antimicrobial Resistance assessing whole-genome-sequencing capacities.
Kristensen T, Sørensen LH, Pedersen SK, Jensen JD, Mordhorst H, Lacy-Roberts N, Lukjancenko O, Luo Y, Hoffmann M, Hendriksen RS. Kristensen T, et al. Among authors: hoffmann m. Microb Genom. 2023 Aug;9(8):mgen001076. doi: 10.1099/mgen.0.001076. Microb Genom. 2023. PMID: 37526643 Free PMC article.
Whole-genome sequencing of gentamicin-resistant Campylobacter coli isolated from U.S. retail meats reveals novel plasmid-mediated aminoglycoside resistance genes.
Chen Y, Mukherjee S, Hoffmann M, Kotewicz ML, Young S, Abbott J, Luo Y, Davidson MK, Allard M, McDermott P, Zhao S. Chen Y, et al. Among authors: hoffmann m. Antimicrob Agents Chemother. 2013 Nov;57(11):5398-405. doi: 10.1128/AAC.00669-13. Epub 2013 Aug 19. Antimicrob Agents Chemother. 2013. PMID: 23959310 Free PMC article.
Comparative genomic analysis and virulence differences in closely related salmonella enterica serotype heidelberg isolates from humans, retail meats, and animals.
Hoffmann M, Zhao S, Pettengill J, Luo Y, Monday SR, Abbott J, Ayers SL, Cinar HN, Muruvanda T, Li C, Allard MW, Whichard J, Meng J, Brown EW, McDermott PF. Hoffmann M, et al. Genome Biol Evol. 2014 May;6(5):1046-68. doi: 10.1093/gbe/evu079. Genome Biol Evol. 2014. PMID: 24732280 Free PMC article.
Genome-wide methylation patterns in Salmonella enterica Subsp. enterica Serovars.
Pirone-Davies C, Hoffmann M, Roberts RJ, Muruvanda T, Timme RE, Strain E, Luo Y, Payne J, Luong K, Song Y, Tsai YC, Boitano M, Clark TA, Korlach J, Evans PS, Allard MW. Pirone-Davies C, et al. Among authors: hoffmann m. PLoS One. 2015 Apr 10;10(4):e0123639. doi: 10.1371/journal.pone.0123639. eCollection 2015. PLoS One. 2015. PMID: 25860355 Free PMC article.
Tracing Origins of the Salmonella Bareilly Strain Causing a Food-borne Outbreak in the United States.
Hoffmann M, Luo Y, Monday SR, Gonzalez-Escalona N, Ottesen AR, Muruvanda T, Wang C, Kastanis G, Keys C, Janies D, Senturk IF, Catalyurek UV, Wang H, Hammack TS, Wolfgang WJ, Schoonmaker-Bopp D, Chu A, Myers R, Haendiges J, Evans PS, Meng J, Strain EA, Allard MW, Brown EW. Hoffmann M, et al. J Infect Dis. 2016 Feb 15;213(4):502-8. doi: 10.1093/infdis/jiv297. Epub 2015 May 20. J Infect Dis. 2016. PMID: 25995194
3,532 results