Matsumoto H - Search Results

1

Alpha 7 nicotinic acetylcholine receptors signaling boosts cell-cell interactions in macrophages effecting anti-inflammatory and organ protection.

Nakamura Y, Matsumoto H, Wu CH, Fukaya D, Uni R, Hirakawa Y, Katagiri M, Yamada S, Ko T, Nomura S, Wada Y, Komuro I, Nangaku M, Inagi R, Inoue T. Nakamura Y, et al. Among authors: matsumoto h. Commun Biol. 2023 Jun 23;6(1):666. doi: 10.1038/s42003-023-05051-2. Commun Biol. 2023. PMID: 37353597 Free PMC article.

2

Novel metric for hyperbolic phylogenetic tree embeddings.

Matsumoto H, Mimori T, Fukunaga T. Matsumoto H, et al. Biol Methods Protoc. 2021 Mar 27;6(1):bpab006. doi: 10.1093/biomethods/bpab006. eCollection 2021. Biol Methods Protoc. 2021. PMID: 33928190 Free PMC article.

3

Persistent thermal input controls steering behavior in Caenorhabditis elegans.

Ikeda M, Matsumoto H, Izquierdo EJ. Ikeda M, et al. Among authors: matsumoto h. PLoS Comput Biol. 2021 Jan 8;17(1):e1007916. doi: 10.1371/journal.pcbi.1007916. eCollection 2021 Jan. PLoS Comput Biol. 2021. PMID: 33417596 Free PMC article.

4

Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans.

Tahara S, Tsuchiya T, Matsumoto H, Ozaki H. Tahara S, et al. Among authors: matsumoto h. BMC Genomics. 2023 Oct 7;24(1):597. doi: 10.1186/s12864-023-09692-9. BMC Genomics. 2023. PMID: 37805453 Free PMC article.

5

Early embryonic mutations reveal dynamics of somatic and germ cell lineages in mice.

Uchimura A, Matsumoto H, Satoh Y, Minakuchi Y, Wakayama S, Wakayama T, Higuchi M, Hashimoto M, Fukumura R, Toyoda A, Gondo Y, Yagi T. Uchimura A, et al. Among authors: matsumoto h. Genome Res. 2022 May;32(5):945-955. doi: 10.1101/gr.276363.121. Epub 2022 May 9. Genome Res. 2022. PMID: 35534232 Free PMC article.

6

Systemic Metabolic Alteration Dependent on the Thyroid-Liver Axis in Early PD.

Miyamoto K, Saiki S, Matsumoto H, Suzuki A, Yamashita Y, Iseki T, Ueno SI, Shiina K, Kataura T, Kamagata K, Imamichi Y, Sasazawa Y, Fujimaki M, Akamatsu W, Hattori N. Miyamoto K, et al. Among authors: matsumoto h. Ann Neurol. 2023 Feb;93(2):303-316. doi: 10.1002/ana.26510. Epub 2022 Oct 4. Ann Neurol. 2023. PMID: 36128871 Free PMC article.

7

SCOUP: a probabilistic model based on the Ornstein-Uhlenbeck process to analyze single-cell expression data during differentiation.

Matsumoto H, Kiryu H. Matsumoto H, et al. BMC Bioinformatics. 2016 Jun 8;17(1):232. doi: 10.1186/s12859-016-1109-3. BMC Bioinformatics. 2016. PMID: 27277014 Free PMC article.

8

Estimation of population genetic parameters using an EM algorithm and sequence data from experimental evolution populations.

Kojima Y, Matsumoto H, Kiryu H. Kojima Y, et al. Among authors: matsumoto h. Bioinformatics. 2020 Jan 1;36(1):221-231. doi: 10.1093/bioinformatics/btz498. Bioinformatics. 2020. PMID: 31218366

9

Exercise Affects Mucosa-Associated Microbiota and Colonic Tumor Formation Induced by Azoxymethane in High-Fat-Diet-Induced Obese Mice.

Yo S, Matsumoto H, Gu T, Sasahira M, Oosawa M, Handa O, Umegaki E, Shiotani A. Yo S, et al. Among authors: matsumoto h. Microorganisms. 2024 May 9;12(5):957. doi: 10.3390/microorganisms12050957. Microorganisms. 2024. PMID: 38792787

10

Incidence Rates of Infections in Rheumatoid Arthritis Patients Treated with Janus Kinase or Interleukin-6 Inhibitors: Results of a Retrospective, Multicenter Cohort Study.

Yoshida S, Miyata M, Suzuki E, Kanno T, Sumichika Y, Saito K, Matsumoto H, Temmoku J, Fujita Y, Matsuoka N, Asano T, Sato S, Migita K. Yoshida S, et al. Among authors: matsumoto h. J Clin Med. 2024 May 20;13(10):3000. doi: 10.3390/jcm13103000. J Clin Med. 2024. PMID: 38792541

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