Steen JA - Search Results

1

Integrative systems biology characterizes immune-mediated neurodevelopmental changes in murine Zika virus microcephaly.

Fujimura K, Guise AJ, Nakayama T, Schlaffner CN, Meziani A, Kumar M, Cheng L, Vaughan DJ, Kodani A, Van Haren S, Parker K, Levy O, Durbin AF, Bosch I, Gehrke L, Steen H, Mochida GH, Steen JA. Fujimura K, et al. Among authors: steen ja. iScience. 2023 May 19;26(7):106909. doi: 10.1016/j.isci.2023.106909. eCollection 2023 Jul 21. iScience. 2023. PMID: 37332674 Free PMC article.

2

Temporal variations of the postnatal rat urinary proteome as a reflection of systemic maturation.

Lee RS, Monigatti F, Lutchman M, Patterson T, Budnik B, Steen JA, Freeman MR, Steen H. Lee RS, et al. Among authors: steen h, steen ja. Proteomics. 2008 Mar;8(5):1097-112. doi: 10.1002/pmic.200700701. Proteomics. 2008. PMID: 18324733

3

Different phosphorylation states of the anaphase promoting complex in response to antimitotic drugs: a quantitative proteomic analysis.

Steen JA, Steen H, Georgi A, Parker K, Springer M, Kirchner M, Hamprecht F, Kirschner MW. Steen JA, et al. Among authors: steen h. Proc Natl Acad Sci U S A. 2008 Apr 22;105(16):6069-74. doi: 10.1073/pnas.0709807104. Epub 2008 Apr 17. Proc Natl Acad Sci U S A. 2008. PMID: 18420821 Free PMC article.

4

FLEXIQuant: a novel tool for the absolute quantification of proteins, and the simultaneous identification and quantification of potentially modified peptides.

Singh S, Springer M, Steen J, Kirschner MW, Steen H. Singh S, et al. J Proteome Res. 2009 May;8(5):2201-10. doi: 10.1021/pr800654s. J Proteome Res. 2009. PMID: 19344176 Free PMC article.

5

The mechanism and pattern of yolk consumption provide insight into embryonic nutrition in Xenopus.

Jorgensen P, Steen JA, Steen H, Kirschner MW. Jorgensen P, et al. Among authors: steen h, steen ja. Development. 2009 May;136(9):1539-48. doi: 10.1242/dev.032425. Development. 2009. PMID: 19363155 Free PMC article.

6

Computational protein profile similarity screening for quantitative mass spectrometry experiments.

Kirchner M, Renard BY, Köthe U, Pappin DJ, Hamprecht FA, Steen H, Steen JA. Kirchner M, et al. Among authors: steen h, steen ja. Bioinformatics. 2010 Jan 1;26(1):77-83. doi: 10.1093/bioinformatics/btp607. Epub 2009 Oct 27. Bioinformatics. 2010. PMID: 19861354

7

MGFp: an open Mascot Generic Format parser library implementation.

Kirchner M, Steen JA, Hamprecht FA, Steen H. Kirchner M, et al. Among authors: steen h, steen ja. J Proteome Res. 2010 May 7;9(5):2762-3. doi: 10.1021/pr100118f. J Proteome Res. 2010. PMID: 20334363

8

Phosphoproteomics.

Ozlu N, Akten B, Timm W, Haseley N, Steen H, Steen JAJ. Ozlu N, et al. Wiley Interdiscip Rev Syst Biol Med. 2010 May-Jun;2(3):255-276. doi: 10.1002/wsbm.41. Wiley Interdiscip Rev Syst Biol Med. 2010. PMID: 20836028 Review.

9

libfbi: a C++ implementation for fast box intersection and application to sparse mass spectrometry data.

Kirchner M, Xu B, Steen H, Steen JA. Kirchner M, et al. Among authors: steen h, steen ja. Bioinformatics. 2011 Apr 15;27(8):1166-7. doi: 10.1093/bioinformatics/btr084. Epub 2011 Feb 16. Bioinformatics. 2011. PMID: 21330291

10

mz5: space- and time-efficient storage of mass spectrometry data sets.

Wilhelm M, Kirchner M, Steen JAJ, Steen H. Wilhelm M, et al. Mol Cell Proteomics. 2012 Jan;11(1):O111.011379. doi: 10.1074/mcp.O111.011379. Epub 2011 Sep 29. Mol Cell Proteomics. 2012. PMID: 21960719 Free PMC article.

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