Surendra A - Search Results

1

Differential Expression Feature Extraction (DEFE): A Case Study in Wheat FHB RNA-Seq Data Analysis.

Pan Y, Surendra A, Liu Z, Ouellet T, Foroud NA. Pan Y, et al. Among authors: surendra a. Methods Mol Biol. 2023;2659:137-159. doi: 10.1007/978-1-0716-3159-1_11. Methods Mol Biol. 2023. PMID: 37249891

2

Identification of transcriptional subtypes in lung adenocarcinoma and squamous cell carcinoma through integrative analysis of microarray and RNA sequencing data.

Fauteux F, Surendra A, McComb S, Pan Y, Hill JJ. Fauteux F, et al. Among authors: surendra a. Sci Rep. 2021 Apr 22;11(1):8709. doi: 10.1038/s41598-021-88209-4. Sci Rep. 2021. PMID: 33888829 Free PMC article.

3

Database of resistance related metabolites in Wheat Fusarium head blight Disease (MWFD).

Surendra A, Cuperlovic-Culf M. Surendra A, et al. Database (Oxford). 2017 Jan 1;2017:bax076. doi: 10.1093/database/bax076. Database (Oxford). 2017. PMID: 29220474 Free PMC article.

4

Dementia with Lewy bodies post-mortem brains reveal differentially methylated CpG sites with biomarker potential.

Shao X, Vishweswaraiah S, Čuperlović-Culf M, Yilmaz A, Greenwood CMT, Surendra A, McGuinness B, Passmore P, Kehoe PG, Maddens ME, Bennett SAL, Green BD, Radhakrishna U, Graham SF. Shao X, et al. Among authors: surendra a. Commun Biol. 2022 Nov 22;5(1):1279. doi: 10.1038/s42003-022-03965-x. Commun Biol. 2022. PMID: 36418427 Free PMC article.

5

Signed Distance Correlation (SiDCo): an online implementation of distance correlation and partial distance correlation for data-driven network analysis.

Monti F, Stewart D, Surendra A, Alecu I, Nguyen-Tran T, Bennett SAL, Čuperlović-Culf M. Monti F, et al. Among authors: surendra a. Bioinformatics. 2023 May 4;39(5):btad210. doi: 10.1093/bioinformatics/btad210. Bioinformatics. 2023. PMID: 37137236 Free PMC article.

6

Metabolomics and computational analysis of the role of monoamine oxidase activity in delirium and SARS-COV-2 infection.

Cuperlovic-Culf M, Cunningham EL, Teimoorinia H, Surendra A, Pan X, Bennett SAL, Jung M, McGuiness B, Passmore AP, Beverland D, Green BD. Cuperlovic-Culf M, et al. Among authors: surendra a. Sci Rep. 2021 May 20;11(1):10629. doi: 10.1038/s41598-021-90243-1. Sci Rep. 2021. PMID: 34017039 Free PMC article.

7

Analysis and Simulation of Glioblastoma Cell Lines-Derived Extracellular Vesicles Metabolome.

Čuperlović-Culf M, Khieu NH, Surendra A, Hewitt M, Charlebois C, Sandhu JK. Čuperlović-Culf M, et al. Among authors: surendra a. Metabolites. 2020 Mar 2;10(3):88. doi: 10.3390/metabo10030088. Metabolites. 2020. PMID: 32131411 Free PMC article.

8

METAbolomics data Balancing with Over-sampling Algorithms (META-BOA): an online resource for addressing class imbalance.

Hashimoto-Roth E, Surendra A, Lavallée-Adam M, Bennett SAL, Čuperlović-Culf M. Hashimoto-Roth E, et al. Among authors: surendra a. Bioinformatics. 2022 Nov 30;38(23):5326-5327. doi: 10.1093/bioinformatics/btac649. Bioinformatics. 2022. PMID: 36222566

9

Mycobiome Sequencing and Analysis Applied to Fungal Community Profiling of the Lower Respiratory Tract During Fungal Pathogenesis.

McTaggart LR, Copeland JK, Surendra A, Wang PW, Husain S, Coburn B, Guttman DS, Kus JV. McTaggart LR, et al. Among authors: surendra a. Front Microbiol. 2019 Mar 15;10:512. doi: 10.3389/fmicb.2019.00512. eCollection 2019. Front Microbiol. 2019. PMID: 30930884 Free PMC article.

10

BATL: Bayesian annotations for targeted lipidomics.

Chitpin JG, Surendra A, Nguyen TT, Taylor GP, Xu H, Alecu I, Ortega R, Tomlinson JJ, Crawley AM, McGuinty M, Schlossmacher MG, Saunders-Pullman R, Cuperlovic-Culf M, Bennett SAL, Perkins TJ. Chitpin JG, et al. Among authors: surendra a. Bioinformatics. 2022 Mar 4;38(6):1593-1599. doi: 10.1093/bioinformatics/btab854. Bioinformatics. 2022. PMID: 34951624 Free PMC article.

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