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RNA-seq data science: From raw data to effective interpretation.
Deshpande D, Chhugani K, Chang Y, Karlsberg A, Loeffler C, Zhang J, Muszyńska A, Munteanu V, Yang H, Rotman J, Tao L, Balliu B, Tseng E, Eskin E, Zhao F, Mohammadi P, P Łabaj P, Mangul S. Deshpande D, et al. Among authors: tseng e. Front Genet. 2023 Mar 13;14:997383. doi: 10.3389/fgene.2023.997383. eCollection 2023. Front Genet. 2023. PMID: 36999049 Free PMC article. Review.
Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing.
Leung SK, Jeffries AR, Castanho I, Jordan BT, Moore K, Davies JP, Dempster EL, Bray NJ, O'Neill P, Tseng E, Ahmed Z, Collier DA, Jeffery ED, Prabhakar S, Schalkwyk L, Jops C, Gandal MJ, Sheynkman GM, Hannon E, Mill J. Leung SK, et al. Among authors: tseng e. Cell Rep. 2021 Nov 16;37(7):110022. doi: 10.1016/j.celrep.2021.110022. Cell Rep. 2021. PMID: 34788620 Free PMC article.
SpaRC: scalable sequence clustering using Apache Spark.
Shi L, Meng X, Tseng E, Mascagni M, Wang Z. Shi L, et al. Among authors: tseng e. Bioinformatics. 2019 Mar 1;35(5):760-768. doi: 10.1093/bioinformatics/bty733. Bioinformatics. 2019. PMID: 30816928
354 results