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Allosteric inactivation of an engineered optogenetic GTPase.
Jain A, Dokholyan NV, Lee AL. Jain A, et al. Among authors: dokholyan nv. Proc Natl Acad Sci U S A. 2023 Apr 4;120(14):e2219254120. doi: 10.1073/pnas.2219254120. Epub 2023 Mar 27. Proc Natl Acad Sci U S A. 2023. PMID: 36972433 Free PMC article.
A structural model reveals energy transduction in dynein.
Serohijos AW, Chen Y, Ding F, Elston TC, Dokholyan NV. Serohijos AW, et al. Among authors: dokholyan nv. Proc Natl Acad Sci U S A. 2006 Dec 5;103(49):18540-5. doi: 10.1073/pnas.0602867103. Epub 2006 Nov 22. Proc Natl Acad Sci U S A. 2006. PMID: 17121997 Free PMC article.
Engineered allosteric activation of kinases in living cells.
Karginov AV, Ding F, Kota P, Dokholyan NV, Hahn KM. Karginov AV, et al. Among authors: dokholyan nv. Nat Biotechnol. 2010 Jul;28(7):743-7. doi: 10.1038/nbt.1639. Epub 2010 Jun 27. Nat Biotechnol. 2010. PMID: 20581846 Free PMC article.
Rational design of a ligand-controlled protein conformational switch.
Dagliyan O, Shirvanyants D, Karginov AV, Ding F, Fee L, Chandrasekaran SN, Freisinger CM, Smolen GA, Huttenlocher A, Hahn KM, Dokholyan NV. Dagliyan O, et al. Among authors: dokholyan nv. Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):6800-4. doi: 10.1073/pnas.1218319110. Epub 2013 Apr 8. Proc Natl Acad Sci U S A. 2013. PMID: 23569285 Free PMC article.
Computational design of chemogenetic and optogenetic split proteins.
Dagliyan O, Krokhotin A, Ozkan-Dagliyan I, Deiters A, Der CJ, Hahn KM, Dokholyan NV. Dagliyan O, et al. Among authors: dokholyan nv. Nat Commun. 2018 Oct 2;9(1):4042. doi: 10.1038/s41467-018-06531-4. Nat Commun. 2018. PMID: 30279442 Free PMC article.
Engineering proteins for allosteric control by light or ligands.
Dagliyan O, Dokholyan NV, Hahn KM. Dagliyan O, et al. Among authors: dokholyan nv. Nat Protoc. 2019 Jun;14(6):1863-1883. doi: 10.1038/s41596-019-0165-3. Epub 2019 May 10. Nat Protoc. 2019. PMID: 31076662 Free PMC article.
328 results