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Fast Evaluation of Viral Emerging Risks (FEVER): A computational tool for biosurveillance, diagnostics, and mutation typing of emerging viral pathogens.
Stromberg ZR, Theiler J, Foley BT, Myers Y Gutiérrez A, Hollander A, Courtney SJ, Gans J, Deshpande A, Martinez-Finley EJ, Mitchell J, Mukundan H, Yusim K, Kubicek-Sutherland JZ. Stromberg ZR, et al. Among authors: theiler j. PLOS Glob Public Health. 2022 Feb 24;2(2):e0000207. doi: 10.1371/journal.pgph.0000207. eCollection 2022. PLOS Glob Public Health. 2022. PMID: 36962401 Free PMC article.
Using human immunodeficiency virus type 1 sequences to infer historical features of the acquired immune deficiency syndrome epidemic and human immunodeficiency virus evolution.
Yusim K, Peeters M, Pybus OG, Bhattacharya T, Delaporte E, Mulanga C, Muldoon M, Theiler J, Korber B. Yusim K, et al. Among authors: theiler j. Philos Trans R Soc Lond B Biol Sci. 2001 Jun 29;356(1410):855-66. doi: 10.1098/rstb.2001.0859. Philos Trans R Soc Lond B Biol Sci. 2001. PMID: 11405933 Free PMC article. Review.
Web-based design and evaluation of T-cell vaccine candidates.
Thurmond J, Yoon H, Kuiken C, Yusim K, Perkins S, Theiler J, Bhattacharya T, Korber B, Fischer W. Thurmond J, et al. Among authors: theiler j. Bioinformatics. 2008 Jul 15;24(14):1639-40. doi: 10.1093/bioinformatics/btn251. Epub 2008 May 29. Bioinformatics. 2008. PMID: 18515277
HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogens.
Fischer W, Giorgi EE, Chakraborty S, Nguyen K, Bhattacharya T, Theiler J, Goloboff PA, Yoon H, Abfalterer W, Foley BT, Tegally H, San JE, de Oliveira T; Network for Genomic Surveillance in South Africa (NGS-SA); Gnanakaran S, Korber B. Fischer W, et al. Among authors: theiler j. Cell Host Microbe. 2021 Jul 14;29(7):1093-1110. doi: 10.1016/j.chom.2021.05.012. Epub 2021 Jun 3. Cell Host Microbe. 2021. PMID: 34242582 Free PMC article. Review.
HIV-1 Neutralizing Antibody Signatures and Application to Epitope-Targeted Vaccine Design.
Bricault CA, Yusim K, Seaman MS, Yoon H, Theiler J, Giorgi EE, Wagh K, Theiler M, Hraber P, Macke JP, Kreider EF, Learn GH, Hahn BH, Scheid JF, Kovacs JM, Shields JL, Lavine CL, Ghantous F, Rist M, Bayne MG, Neubauer GH, McMahan K, Peng H, Chéneau C, Jones JJ, Zeng J, Ochsenbauer C, Nkolola JP, Stephenson KE, Chen B, Gnanakaran S, Bonsignori M, Williams LD, Haynes BF, Doria-Rose N, Mascola JR, Montefiori DC, Barouch DH, Korber B. Bricault CA, et al. Among authors: theiler j, theiler m. Cell Host Microbe. 2019 Jan 9;25(1):59-72.e8. doi: 10.1016/j.chom.2018.12.001. Cell Host Microbe. 2019. PMID: 30629920 Free PMC article.
Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus.
Korber B, Fischer WM, Gnanakaran S, Yoon H, Theiler J, Abfalterer W, Hengartner N, Giorgi EE, Bhattacharya T, Foley B, Hastie KM, Parker MD, Partridge DG, Evans CM, Freeman TM, de Silva TI; Sheffield COVID-19 Genomics Group; McDanal C, Perez LG, Tang H, Moon-Walker A, Whelan SP, LaBranche CC, Saphire EO, Montefiori DC. Korber B, et al. Among authors: theiler j. Cell. 2020 Aug 20;182(4):812-827.e19. doi: 10.1016/j.cell.2020.06.043. Epub 2020 Jul 3. Cell. 2020. PMID: 32697968 Free PMC article.
61 results