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Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study.
Niehues JM, Quirke P, West NP, Grabsch HI, van Treeck M, Schirris Y, Veldhuizen GP, Hutchins GGA, Richman SD, Foersch S, Brinker TJ, Fukuoka J, Bychkov A, Uegami W, Truhn D, Brenner H, Brobeil A, Hoffmeister M, Kather JN. Niehues JM, et al. Among authors: brinker tj. Cell Rep Med. 2023 Apr 18;4(4):100980. doi: 10.1016/j.xcrm.2023.100980. Epub 2023 Mar 22. Cell Rep Med. 2023. PMID: 36958327 Free PMC article.
Effects of Label Noise on Deep Learning-Based Skin Cancer Classification.
Hekler A, Kather JN, Krieghoff-Henning E, Utikal JS, Meier F, Gellrich FF, Upmeier Zu Belzen J, French L, Schlager JG, Ghoreschi K, Wilhelm T, Kutzner H, Berking C, Heppt MV, Haferkamp S, Sondermann W, Schadendorf D, Schilling B, Izar B, Maron R, Schmitt M, Fröhling S, Lipka DB, Brinker TJ. Hekler A, et al. Among authors: brinker tj. Front Med (Lausanne). 2020 May 6;7:177. doi: 10.3389/fmed.2020.00177. eCollection 2020. Front Med (Lausanne). 2020. PMID: 32435646 Free PMC article.
Hidden Variables in Deep Learning Digital Pathology and Their Potential to Cause Batch Effects: Prediction Model Study.
Schmitt M, Maron RC, Hekler A, Stenzinger A, Hauschild A, Weichenthal M, Tiemann M, Krahl D, Kutzner H, Utikal JS, Haferkamp S, Kather JN, Klauschen F, Krieghoff-Henning E, Fröhling S, von Kalle C, Brinker TJ. Schmitt M, et al. Among authors: brinker tj. J Med Internet Res. 2021 Feb 2;23(2):e23436. doi: 10.2196/23436. J Med Internet Res. 2021. PMID: 33528370 Free PMC article.
Deep learning detects genetic alterations in cancer histology generated by adversarial networks.
Krause J, Grabsch HI, Kloor M, Jendrusch M, Echle A, Buelow RD, Boor P, Luedde T, Brinker TJ, Trautwein C, Pearson AT, Quirke P, Jenniskens J, Offermans K, van den Brandt PA, Kather JN. Krause J, et al. Among authors: brinker tj. J Pathol. 2021 May;254(1):70-79. doi: 10.1002/path.5638. Epub 2021 Mar 16. J Pathol. 2021. PMID: 33565124 Free article.
Artificial Intelligence-based Detection of FGFR3 Mutational Status Directly from Routine Histology in Bladder Cancer: A Possible Preselection for Molecular Testing?
Loeffler CML, Ortiz Bruechle N, Jung M, Seillier L, Rose M, Laleh NG, Knuechel R, Brinker TJ, Trautwein C, Gaisa NT, Kather JN. Loeffler CML, et al. Among authors: brinker tj. Eur Urol Focus. 2022 Mar;8(2):472-479. doi: 10.1016/j.euf.2021.04.007. Epub 2021 Apr 22. Eur Urol Focus. 2022. PMID: 33895087 Free article.
Integrating Patient Data Into Skin Cancer Classification Using Convolutional Neural Networks: Systematic Review.
Höhn J, Hekler A, Krieghoff-Henning E, Kather JN, Utikal JS, Meier F, Gellrich FF, Hauschild A, French L, Schlager JG, Ghoreschi K, Wilhelm T, Kutzner H, Heppt M, Haferkamp S, Sondermann W, Schadendorf D, Schilling B, Maron RC, Schmitt M, Jutzi T, Fröhling S, Lipka DB, Brinker TJ. Höhn J, et al. Among authors: brinker tj. J Med Internet Res. 2021 Jul 2;23(7):e20708. doi: 10.2196/20708. J Med Internet Res. 2021. PMID: 34255646 Free PMC article. Review.
A benchmark for neural network robustness in skin cancer classification.
Maron RC, Schlager JG, Haggenmüller S, von Kalle C, Utikal JS, Meier F, Gellrich FF, Hobelsberger S, Hauschild A, French L, Heinzerling L, Schlaak M, Ghoreschi K, Hilke FJ, Poch G, Heppt MV, Berking C, Haferkamp S, Sondermann W, Schadendorf D, Schilling B, Goebeler M, Krieghoff-Henning E, Hekler A, Fröhling S, Lipka DB, Kather JN, Brinker TJ. Maron RC, et al. Among authors: brinker tj. Eur J Cancer. 2021 Sep;155:191-199. doi: 10.1016/j.ejca.2021.06.047. Epub 2021 Aug 11. Eur J Cancer. 2021. PMID: 34388516 Free article.
Weakly supervised annotation-free cancer detection and prediction of genotype in routine histopathology.
Schrammen PL, Ghaffari Laleh N, Echle A, Truhn D, Schulz V, Brinker TJ, Brenner H, Chang-Claude J, Alwers E, Brobeil A, Kloor M, Heij LR, Jäger D, Trautwein C, Grabsch HI, Quirke P, West NP, Hoffmeister M, Kather JN. Schrammen PL, et al. Among authors: brinker tj. J Pathol. 2022 Jan;256(1):50-60. doi: 10.1002/path.5800. Epub 2021 Oct 22. J Pathol. 2022. PMID: 34561876 Free article.
119 results