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Understanding repertoire sequencing data through a multiscale computational model of the germinal center.
García-Valiente R, Merino Tejero E, Stratigopoulou M, Balashova D, Jongejan A, Lashgari D, Pélissier A, Caniels TG, Claireaux MAF, Musters A, van Gils MJ, Rodríguez Martínez M, de Vries N, Meyer-Hermann M, Guikema JEJ, Hoefsloot H, van Kampen AHC. García-Valiente R, et al. Among authors: rodriguez martinez m. NPJ Syst Biol Appl. 2023 Mar 16;9(1):8. doi: 10.1038/s41540-023-00271-y. NPJ Syst Biol Appl. 2023. PMID: 36927990 Free PMC article.
A Probabilistic Model of the Germinal Center Reaction.
Thomas MJ, Klein U, Lygeros J, Rodríguez Martínez M. Thomas MJ, et al. Among authors: rodriguez martinez m. Front Immunol. 2019 Apr 3;10:689. doi: 10.3389/fimmu.2019.00689. eCollection 2019. Front Immunol. 2019. PMID: 31001283 Free PMC article.
Convergent evolution and B-cell recirculation in germinal centers in a human lymph node.
Pelissier A, Stratigopoulou M, Donner N, Dimitriadis E, Bende RJ, Guikema JE, Rodriguez Martinez M, van Noesel CJ. Pelissier A, et al. Among authors: rodriguez martinez m. Life Sci Alliance. 2023 Aug 28;6(11):e202301959. doi: 10.26508/lsa.202301959. Print 2023 Nov. Life Sci Alliance. 2023. PMID: 37640448 Free PMC article.
PIMKL: Pathway-Induced Multiple Kernel Learning.
Manica M, Cadow J, Mathis R, Rodríguez Martínez M. Manica M, et al. Among authors: rodriguez martinez m. NPJ Syst Biol Appl. 2019 Mar 5;5:8. doi: 10.1038/s41540-019-0086-3. eCollection 2019. NPJ Syst Biol Appl. 2019. PMID: 30854223 Free PMC article.
A Single-Cell Atlas of the Tumor and Immune Ecosystem of Human Breast Cancer.
Wagner J, Rapsomaniki MA, Chevrier S, Anzeneder T, Langwieder C, Dykgers A, Rees M, Ramaswamy A, Muenst S, Soysal SD, Jacobs A, Windhager J, Silina K, van den Broek M, Dedes KJ, Rodríguez Martínez M, Weber WP, Bodenmiller B. Wagner J, et al. Among authors: rodriguez martinez m. Cell. 2019 May 16;177(5):1330-1345.e18. doi: 10.1016/j.cell.2019.03.005. Epub 2019 Apr 11. Cell. 2019. PMID: 30982598 Free PMC article. Clinical Trial.
Diagnostics and correction of batch effects in large-scale proteomic studies: a tutorial.
Čuklina J, Lee CH, Williams EG, Sajic T, Collins BC, Rodríguez Martínez M, Sharma VS, Wendt F, Goetze S, Keele GR, Wollscheid B, Aebersold R, Pedrioli PGA. Čuklina J, et al. Among authors: rodriguez martinez m. Mol Syst Biol. 2021 Aug;17(8):e10240. doi: 10.15252/msb.202110240. Mol Syst Biol. 2021. PMID: 34432947 Free PMC article. Review.
158 results