Woodhouse I - Search Results

1

Novel canonical and non-canonical viral antigens extend current targets for immunotherapy of HPV-driven cervical cancer.

Peng X, Woodhouse I, Hancock G, Parker R, Marx K, Müller J, Salatino S, Partridge T, Nicastri A, Liao H, Kruppa G, Hellner K, Dorrell L, Ternette N. Peng X, et al. Among authors: woodhouse i. iScience. 2023 Feb 2;26(3):106101. doi: 10.1016/j.isci.2023.106101. eCollection 2023 Mar 17. iScience. 2023. PMID: 36876126 Free PMC article.

2

CiiiDER: A tool for predicting and analysing transcription factor binding sites.

Gearing LJ, Cumming HE, Chapman R, Finkel AM, Woodhouse IB, Luu K, Gould JA, Forster SC, Hertzog PJ. Gearing LJ, et al. PLoS One. 2019 Sep 4;14(9):e0215495. doi: 10.1371/journal.pone.0215495. eCollection 2019. PLoS One. 2019. PMID: 31483836 Free PMC article.

3

Broad Auto-Reactive IgM Responses Are Common In Critically Ill COVID-19 Patients.

Maier C, Wong A, Woodhouse I, Schneider F, Kulpa D, Silvestri G. Maier C, et al. Among authors: woodhouse i. Res Sq [Preprint]. 2020 Dec 31:rs.3.rs-128348. doi: 10.21203/rs.3.rs-128348/v1. Res Sq. 2020. PMID: 33398261 Free PMC article. Updated. Preprint.

4

HLA binding of self-peptides is biased towards proteins with specific molecular functions.

Karnaukhov V, Paes W, Woodhouse IB, Partridge T, Nicastri A, Brackenridge S, Scherbinin D, Chudakov DM, Zvyagin IV, Ternette N, Koohy H, Borrow P, Shugay M. Karnaukhov V, et al. bioRxiv [Preprint]. 2021 Feb 17:2021.02.16.431395. doi: 10.1101/2021.02.16.431395. bioRxiv. 2021. PMID: 33619495 Free PMC article. Preprint.

5

Decitabine increases neoantigen and cancer testis antigen expression to enhance T-cell-mediated toxicity against glioblastoma.

Ma R, Rei M, Woodhouse I, Ferris K, Kirschner S, Chandran A, Gileadi U, Chen JL, Pereira Pinho M, Ariosa-Morejon Y, Kriaucionis S, Ternette N, Koohy H, Ansorge O, Ogg G, Plaha P, Cerundolo V. Ma R, et al. Among authors: woodhouse i. Neuro Oncol. 2022 Dec 1;24(12):2093-2106. doi: 10.1093/neuonc/noac107. Neuro Oncol. 2022. PMID: 35468205 Free PMC article.

6

Ionizing Radiation Drives Key Regulators of Antigen Presentation and a Global Expansion of the Immunopeptidome.

Tailor A, Estephan H, Parker R, Woodhouse I, Abdulghani M, Nicastri A, Jones K, Salatino S, Muschel R, Humphrey T, Giaccia A, Ternette N. Tailor A, et al. Among authors: woodhouse i. Mol Cell Proteomics. 2022 Nov;21(11):100410. doi: 10.1016/j.mcpro.2022.100410. Epub 2022 Sep 9. Mol Cell Proteomics. 2022. PMID: 36089194 Free PMC article.

7

HLA variants have different preferences to present proteins with specific molecular functions which are complemented in frequent haplotypes.

Karnaukhov V, Paes W, Woodhouse IB, Partridge T, Nicastri A, Brackenridge S, Shcherbinin D, Chudakov DM, Zvyagin IV, Ternette N, Koohy H, Borrow P, Shugay M. Karnaukhov V, et al. Among authors: woodhouse ib. Front Immunol. 2022 Dec 20;13:1067463. doi: 10.3389/fimmu.2022.1067463. eCollection 2022. Front Immunol. 2022. PMID: 36605212 Free PMC article.

8

MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer.

Liao H, Barra C, Zhou Z, Peng X, Woodhouse I, Tailor A, Parker R, Carré A, Borrow P, Hogan MJ, Paes W, Eisenlohr LC, Mallone R, Nielsen M, Ternette N. Liao H, et al. Among authors: woodhouse i. Nat Commun. 2024 Jan 22;15(1):661. doi: 10.1038/s41467-023-44460-z. Nat Commun. 2024. PMID: 38253617 Free PMC article.

9

The physiological interactome of TCR-like antibody therapeutics in human tissues.

Marrer-Berger E, Nicastri A, Augustin A, Kramar V, Liao H, Hanisch LJ, Carpy A, Weinzierl T, Durr E, Schaub N, Nudischer R, Ortiz-Franyuti D, Breous-Nystrom E, Stucki J, Hobi N, Raggi G, Cabon L, Lezan E, Umaña P, Woodhouse I, Bujotzek A, Klein C, Ternette N. Marrer-Berger E, et al. Among authors: woodhouse i. Nat Commun. 2024 Apr 16;15(1):3271. doi: 10.1038/s41467-024-47062-5. Nat Commun. 2024. PMID: 38627373 Free PMC article.

10

Evaluating performance of existing computational models in predicting CD8+ T cell pathogenic epitopes and cancer neoantigens.

Buckley PR, Lee CH, Ma R, Woodhouse I, Woo J, Tsvetkov VO, Shcherbinin DS, Antanaviciute A, Shughay M, Rei M, Simmons A, Koohy H. Buckley PR, et al. Among authors: woodhouse i. Brief Bioinform. 2022 May 13;23(3):bbac141. doi: 10.1093/bib/bbac141. Brief Bioinform. 2022. PMID: 35471658 Free PMC article.

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