Thermes C - Search Results

1

Transcriptome architecture and regulation at environmental transitions in flavobacteria: the case of an important fish pathogen.

Guérin C, Lee BH, Fradet B, van Dijk E, Mirauta B, Thermes C, Bernardet JF, Repoila F, Duchaud E, Nicolas P, Rochat T. Guérin C, et al. Among authors: thermes c. ISME Commun. 2021 Jul 7;1(1):33. doi: 10.1038/s43705-021-00029-9. ISME Commun. 2021. PMID: 36739365 Free PMC article.

2

Genomics in the long-read sequencing era.

van Dijk EL, Naquin D, Gorrichon K, Jaszczyszyn Y, Ouazahrou R, Thermes C, Hernandez C. van Dijk EL, et al. Among authors: thermes c. Trends Genet. 2023 Sep;39(9):649-671. doi: 10.1016/j.tig.2023.04.006. Epub 2023 May 23. Trends Genet. 2023. PMID: 37230864 Review.

3

OKseqHMM: a genome-wide replication fork directionality analysis toolkit.

Liu Y, Wu X, d'Aubenton-Carafa Y, Thermes C, Chen CL. Liu Y, et al. Among authors: thermes c. Nucleic Acids Res. 2023 Feb 28;51(4):e22. doi: 10.1093/nar/gkac1239. Nucleic Acids Res. 2023. PMID: 36629249 Free PMC article.

4

Mistimed origin licensing and activation stabilize common fragile sites under tight DNA-replication checkpoint activation.

Brison O, Gnan S, Azar D, Koundrioukoff S, Melendez-Garcia R, Kim SJ, Schmidt M, El-Hilali S, Jaszczyszyn Y, Lachages AM, Thermes C, Chen CL, Debatisse M. Brison O, et al. Among authors: thermes c. Nat Struct Mol Biol. 2023 Apr;30(4):539-550. doi: 10.1038/s41594-023-00949-1. Epub 2023 Apr 6. Nat Struct Mol Biol. 2023. PMID: 37024657

5

Genome-wide measurement of DNA replication fork directionality and quantification of DNA replication initiation and termination with Okazaki fragment sequencing.

Wu X, Liu Y, d'Aubenton-Carafa Y, Thermes C, Hyrien O, Chen CL, Petryk N. Wu X, et al. Among authors: thermes c. Nat Protoc. 2023 Apr;18(4):1260-1295. doi: 10.1038/s41596-022-00793-5. Epub 2023 Jan 18. Nat Protoc. 2023. PMID: 36653528 Review.

6

DNA methylation and hydroxymethylation characterize the identity of D1 and D2 striatal projection neurons.

Marion-Poll L, Roussarie JP, Taing L, Dard-Dascot C, Servant N, Jaszczyszyn Y, Jordi E, Mulugeta E, Hervé D, Bourc'his D, Greengard P, Thermes C, Girault JA. Marion-Poll L, et al. Among authors: thermes c. Commun Biol. 2022 Dec 1;5(1):1321. doi: 10.1038/s42003-022-04269-w. Commun Biol. 2022. PMID: 36456703 Free PMC article.

7

GC content, but not nucleosome positioning, directly contributes to intron splicing efficiency in Paramecium.

Gnan S, Matelot M, Weiman M, Arnaiz O, Guérin F, Sperling L, Bétermier M, Thermes C, Chen CL, Duharcourt S. Gnan S, et al. Among authors: thermes c. Genome Res. 2022 Apr;32(4):699-709. doi: 10.1101/gr.276125.121. Epub 2022 Mar 9. Genome Res. 2022. PMID: 35264448 Free PMC article.

8

A Small RNA-Seq Protocol with Less Bias and Improved Capture of 2'-O-Methyl RNAs.

van Dijk EL, Thermes C. van Dijk EL, et al. Among authors: thermes c. Methods Mol Biol. 2021;2298:153-167. doi: 10.1007/978-1-0716-1374-0_10. Methods Mol Biol. 2021. PMID: 34085244

9

Contrasting Gene Decay in Subterranean Vertebrates: Insights from Cavefishes and Fossorial Mammals.

Policarpo M, Fumey J, Lafargeas P, Naquin D, Thermes C, Naville M, Dechaud C, Volff JN, Cabau C, Klopp C, Møller PR, Bernatchez L, García-Machado E, Rétaux S, Casane D. Policarpo M, et al. Among authors: thermes c. Mol Biol Evol. 2021 Jan 23;38(2):589-605. doi: 10.1093/molbev/msaa249. Mol Biol Evol. 2021. PMID: 32986833 Free PMC article.

10

Transcription-mediated organization of the replication initiation program across large genes sets common fragile sites genome-wide.

Brison O, El-Hilali S, Azar D, Koundrioukoff S, Schmidt M, Nähse V, Jaszczyszyn Y, Lachages AM, Dutrillaux B, Thermes C, Debatisse M, Chen CL. Brison O, et al. Among authors: thermes c. Nat Commun. 2019 Dec 13;10(1):5693. doi: 10.1038/s41467-019-13674-5. Nat Commun. 2019. PMID: 31836700 Free PMC article.

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