Dudek SM - Search Results

1

The Penn Medicine BioBank: Towards a Genomics-Enabled Learning Healthcare System to Accelerate Precision Medicine in a Diverse Population.

Verma A, Damrauer SM, Naseer N, Weaver J, Kripke CM, Guare L, Sirugo G, Kember RL, Drivas TG, Dudek SM, Bradford Y, Lucas A, Judy R, Verma SS, Meagher E, Nathanson KL, Feldman M, Ritchie MD, Rader DJ, For The Penn Medicine BioBank. Verma A, et al. Among authors: dudek sm. J Pers Med. 2022 Nov 29;12(12):1974. doi: 10.3390/jpm12121974. J Pers Med. 2022. PMID: 36556195 Free PMC article.

2

Parallel multifactor dimensionality reduction: a tool for the large-scale analysis of gene-gene interactions.

Bush WS, Dudek SM, Ritchie MD. Bush WS, et al. Among authors: dudek sm. Bioinformatics. 2006 Sep 1;22(17):2173-4. doi: 10.1093/bioinformatics/btl347. Epub 2006 Jun 29. Bioinformatics. 2006. PMID: 16809395 Free PMC article.

3

Data simulation software for whole-genome association and other studies in human genetics.

Dudek SM, Motsinger AA, Velez DR, Williams SM, Ritchie MD. Dudek SM, et al. Pac Symp Biocomput. 2006:499-510. Pac Symp Biocomput. 2006. PMID: 17094264 Free article.

4

Comparison of approaches for machine-learning optimization of neural networks for detecting gene-gene interactions in genetic epidemiology.

Motsinger-Reif AA, Dudek SM, Hahn LW, Ritchie MD. Motsinger-Reif AA, et al. Among authors: dudek sm. Genet Epidemiol. 2008 May;32(4):325-40. doi: 10.1002/gepi.20307. Genet Epidemiol. 2008. PMID: 18265411

5

Alternative contingency table measures improve the power and detection of multifactor dimensionality reduction.

Bush WS, Edwards TL, Dudek SM, McKinney BA, Ritchie MD. Bush WS, et al. Among authors: dudek sm. BMC Bioinformatics. 2008 May 16;9:238. doi: 10.1186/1471-2105-9-238. BMC Bioinformatics. 2008. PMID: 18485205 Free PMC article.

6

Exploring the performance of Multifactor Dimensionality Reduction in large scale SNP studies and in the presence of genetic heterogeneity among epistatic disease models.

Edwards TL, Lewis K, Velez DR, Dudek S, Ritchie MD. Edwards TL, et al. Hum Hered. 2009;67(3):183-92. doi: 10.1159/000181157. Epub 2008 Dec 15. Hum Hered. 2009. PMID: 19077437 Free PMC article.

7

Biofilter: a knowledge-integration system for the multi-locus analysis of genome-wide association studies.

Bush WS, Dudek SM, Ritchie MD. Bush WS, et al. Among authors: dudek sm. Pac Symp Biocomput. 2009:368-79. Pac Symp Biocomput. 2009. PMID: 19209715 Free PMC article.

8

A cross-validation procedure for general pedigrees and matched odds ratio fitness metric implemented for the multifactor dimensionality reduction pedigree disequilibrium test.

Edwards TL, Torstensen E, Dudek S, Martin ER, Ritchie MD. Edwards TL, et al. Genet Epidemiol. 2010 Feb;34(2):194-9. doi: 10.1002/gepi.20447. Genet Epidemiol. 2010. PMID: 19697353 Free PMC article.

9

Finding unique filter sets in PLATO: a precursor to efficient interaction analysis in GWAS data.

Grady BJ, Torstenson E, Dudek SM, Giles J, Sexton D, Ritchie MD. Grady BJ, et al. Among authors: dudek sm. Pac Symp Biocomput. 2010:315-26. Pac Symp Biocomput. 2010. PMID: 19908384 Free PMC article.

10

Visualizing SNP statistics in the context of linkage disequilibrium using LD-Plus.

Bush WS, Dudek SM, Ritchie MD. Bush WS, et al. Among authors: dudek sm. Bioinformatics. 2010 Feb 15;26(4):578-9. doi: 10.1093/bioinformatics/btp678. Epub 2010 Feb 3. Bioinformatics. 2010. PMID: 20130027 Free PMC article.

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