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Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing.
Life Sci Alliance. 2022 Dec 16;6(1):e202201701. doi: 10.26508/lsa.202201701. Print 2023 Jan.
Life Sci Alliance. 2022.
PMID: 36526371
Free PMC article.
Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets.
Zhao J, Wang G, Ming J, Lin Z, Wang Y; Tabula Microcebus Consortium; Wu AR, Yang C.
Zhao J, et al.
Nat Comput Sci. 2022 May;2(5):317-330. doi: 10.1038/s43588-022-00251-y. Epub 2022 May 30.
Nat Comput Sci. 2022.
PMID: 38177826
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An organism-wide atlas of hormonal signaling based on the mouse lemur single-cell transcriptome.
Liu S, Ezran C, Wang MFZ, Li Z, Awayan K; Tabula Microcebus Consortium; Long JZ, De Vlaminck I, Wang S, Epelbaum J, Kuo CS, Terrien J, Krasnow MA, Ferrell JE Jr.
Liu S, et al.
Nat Commun. 2024 Mar 11;15(1):2188. doi: 10.1038/s41467-024-46070-9.
Nat Commun. 2024.
PMID: 38467625
Free PMC article.
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The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans.
Tabula Sapiens Consortium*; Jones RC, Karkanias J, Krasnow MA, Pisco AO, Quake SR, Salzman J, Yosef N, Bulthaup B, Brown P, Harper W, Hemenez M, Ponnusamy R, Salehi A, Sanagavarapu BA, Spallino E, Aaron KA, Concepcion W, Gardner JM, Kelly B, Neidlinger N, Wang Z, Crasta S, Kolluru S, Morri M, Tan SY, Travaglini KJ, Xu C, Alcántara-Hernández M, Almanzar N, Antony J, Beyersdorf B, Burhan D, Calcuttawala K, Carter MM, Chan CKF, Chang CA, Chang S, Colville A, Culver RN, Cvijović I, D'Amato G, Ezran C, Galdos FX, Gillich A, Goodyer WR, Hang Y, Hayashi A, Houshdaran S, Huang X, Irwin JC, Jang S, Juanico JV, Kershner AM, Kim S, Kiss B, Kong W, Kumar ME, Kuo AH, Li B, Loeb GB, Lu WJ, Mantri S, Markovic M, McAlpine PL, de Morree A, Mrouj K, Mukherjee S, Muser T, Neuhöfer P, Nguyen TD, Perez K, Puluca N, Qi Z, Rao P, Raquer-McKay H, Schaum N, Scott B, Seddighzadeh B, Segal J, Sen S, Sikandar S, Spencer SP, Steffes LC, Subramaniam VR, Swarup A, Swift M, Van Treuren W, Trimm E, Veizades S, Vijayakumar S, Vo KC, Vorperian SK, Wang W, Weinstein HNW, Winkler J, Wu TTH, Xie J, Yung AR, Zhang Y, Detweiler AM, Mekonen H, Neff NF, Sit RV, Tan M, Yan J, Bean GR, Charu V, Forgó E, Martin BA, Ozawa MG,…
See abstract for full author list ➔
Tabula Sapiens Consortium*, et al. Among authors: vemuri vnp.
Science. 2022 May 13;376(6594):eabl4896. doi: 10.1126/science.abl4896. Epub 2022 May 13.
Science. 2022.
PMID: 35549404
Free PMC article.
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Publisher Correction: Cell types of origin of the cell-free transcriptome.
Vorperian SK, Moufarrej MN; Tabula Sapiens Consortium; Quake SR.
Vorperian SK, et al.
Nat Biotechnol. 2022 Jun;40(6):974. doi: 10.1038/s41587-022-01293-3.
Nat Biotechnol. 2022.
PMID: 35347330
Free PMC article.
No abstract available.
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Cell types of origin of the cell-free transcriptome.
Vorperian SK, Moufarrej MN; Tabula Sapiens Consortium; Quake SR.
Vorperian SK, et al.
Nat Biotechnol. 2022 Jun;40(6):855-861. doi: 10.1038/s41587-021-01188-9. Epub 2022 Feb 7.
Nat Biotechnol. 2022.
PMID: 35132263
Free PMC article.
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Label-free imaging and classification of live P. falciparum enables high performance parasitemia quantification without fixation or staining.
Lebel P, Dial R, Vemuri VNP, Garcia V, DeRisi J, Gómez-Sjöberg R.
Lebel P, et al. Among authors: vemuri vnp.
PLoS Comput Biol. 2021 Aug 9;17(8):e1009257. doi: 10.1371/journal.pcbi.1009257. eCollection 2021 Aug.
PLoS Comput Biol. 2021.
PMID: 34370724
Free PMC article.
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Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Association.
Aeffner F, Zarella MD, Buchbinder N, Bui MM, Goodman MR, Hartman DJ, Lujan GM, Molani MA, Parwani AV, Lillard K, Turner OC, Vemuri VNP, Yuil-Valdes AG, Bowman D.
Aeffner F, et al. Among authors: vemuri vnp.
J Pathol Inform. 2019 Mar 8;10:9. doi: 10.4103/jpi.jpi_82_18. eCollection 2019.
J Pathol Inform. 2019.
PMID: 30984469
Free PMC article.
Review.
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