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Tensor image registration library: Deformable registration of stand-alone histology images to whole-brain post-mortem MRI data.
Huszar IN, Pallebage-Gamarallage M, Bangerter-Christensen S, Brooks H, Fitzgibbon S, Foxley S, Hiemstra M, Howard AFD, Jbabdi S, Kor DZL, Leonte A, Mollink J, Smart A, Tendler BC, Turner MR, Ansorge O, Miller KL, Jenkinson M. Huszar IN, et al. Among authors: pallebage gamarallage m. Neuroimage. 2023 Jan;265:119792. doi: 10.1016/j.neuroimage.2022.119792. Epub 2022 Dec 9. Neuroimage. 2023. PMID: 36509214 Free PMC article.
Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging.
Mollink J, Kleinnijenhuis M, Cappellen van Walsum AV, Sotiropoulos SN, Cottaar M, Mirfin C, Heinrich MP, Jenkinson M, Pallebage-Gamarallage M, Ansorge O, Jbabdi S, Miller KL. Mollink J, et al. Neuroimage. 2017 Aug 15;157:561-574. doi: 10.1016/j.neuroimage.2017.06.001. Epub 2017 Jun 8. Neuroimage. 2017. PMID: 28602815 Free PMC article.
Joint modelling of diffusion MRI and microscopy.
Howard AF, Mollink J, Kleinnijenhuis M, Pallebage-Gamarallage M, Bastiani M, Cottaar M, Miller KL, Jbabdi S. Howard AF, et al. Among authors: pallebage gamarallage m. Neuroimage. 2019 Nov 1;201:116014. doi: 10.1016/j.neuroimage.2019.116014. Epub 2019 Jul 14. Neuroimage. 2019. PMID: 31315062 Free PMC article.
Methods for quantitative susceptibility and R2* mapping in whole post-mortem brains at 7T applied to amyotrophic lateral sclerosis.
Wang C, Foxley S, Ansorge O, Bangerter-Christensen S, Chiew M, Leonte A, Menke RA, Mollink J, Pallebage-Gamarallage M, Turner MR, Miller KL, Tendler BC. Wang C, et al. Among authors: pallebage gamarallage m. Neuroimage. 2020 Nov 15;222:117216. doi: 10.1016/j.neuroimage.2020.117216. Epub 2020 Aug 1. Neuroimage. 2020. PMID: 32745677 Free PMC article.
An automated pipeline for extracting histological stain area fraction for voxelwise quantitative MRI-histology comparisons.
Kor DZL, Jbabdi S, Huszar IN, Mollink J, Tendler BC, Foxley S, Wang C, Scott C, Smart A, Ansorge O, Pallebage-Gamarallage M, Miller KL, Howard AFD. Kor DZL, et al. Among authors: pallebage gamarallage m. Neuroimage. 2022 Dec 1;264:119726. doi: 10.1016/j.neuroimage.2022.119726. Epub 2022 Nov 9. Neuroimage. 2022. PMID: 36368503 Free PMC article.
Dissecting the pathobiology of altered MRI signal in amyotrophic lateral sclerosis: A post mortem whole brain sampling strategy for the integration of ultra-high-field MRI and quantitative neuropathology.
Pallebage-Gamarallage M, Foxley S, Menke RAL, Huszar IN, Jenkinson M, Tendler BC, Wang C, Jbabdi S, Turner MR, Miller KL, Ansorge O. Pallebage-Gamarallage M, et al. BMC Neurosci. 2018 Mar 13;19(1):11. doi: 10.1186/s12868-018-0416-1. BMC Neurosci. 2018. PMID: 29529995 Free PMC article.
The Digital Brain Bank, an open access platform for post-mortem imaging datasets.
Tendler BC, Hanayik T, Ansorge O, Bangerter-Christensen S, Berns GS, Bertelsen MF, Bryant KL, Foxley S, van den Heuvel MP, Howard AFD, Huszar IN, Khrapitchev AA, Leonte A, Manger PR, Menke RAL, Mollink J, Mortimer D, Pallebage-Gamarallage M, Roumazeilles L, Sallet J, Scholtens LH, Scott C, Smart A, Turner MR, Wang C, Jbabdi S, Mars RB, Miller KL. Tendler BC, et al. Among authors: pallebage gamarallage m. Elife. 2022 Mar 17;11:e73153. doi: 10.7554/eLife.73153. Elife. 2022. PMID: 35297760 Free PMC article.
White matter changes in the perforant path area in patients with amyotrophic lateral sclerosis.
Mollink J, Hiemstra M, Miller KL, Huszar IN, Jenkinson M, Raaphorst J, Wiesmann M, Ansorge O, Pallebage-Gamarallage M, van Cappellen van Walsum AM. Mollink J, et al. Among authors: pallebage gamarallage m. Neuropathol Appl Neurobiol. 2019 Oct;45(6):570-585. doi: 10.1111/nan.12555. Epub 2019 May 14. Neuropathol Appl Neurobiol. 2019. PMID: 31002412 Free PMC article.
30 results