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Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity.
Shaffer JP, Nothias LF, Thompson LR, Sanders JG, Salido RA, Couvillion SP, Brejnrod AD, Lejzerowicz F, Haiminen N, Huang S, Lutz HL, Zhu Q, Martino C, Morton JT, Karthikeyan S, Nothias-Esposito M, Dührkop K, Böcker S, Kim HW, Aksenov AA, Bittremieux W, Minich JJ, Marotz C, Bryant MM, Sanders K, Schwartz T, Humphrey G, Vásquez-Baeza Y, Tripathi A, Parida L, Carrieri AP, Beck KL, Das P, González A, McDonald D, Ladau J, Karst SM, Albertsen M, Ackermann G, DeReus J, Thomas T, Petras D, Shade A, Stegen J, Song SJ, Metz TO, Swafford AD, Dorrestein PC, Jansson JK, Gilbert JA, Knight R; Earth Microbiome Project 500 (EMP500) Consortium. Shaffer JP, et al. Among authors: karst sm. Nat Microbiol. 2022 Dec;7(12):2128-2150. doi: 10.1038/s41564-022-01266-x. Epub 2022 Nov 28. Nat Microbiol. 2022. PMID: 36443458 Free PMC article.
Complete Genome Sequence of Actinobaculum schaalii Strain CCUG 27420.
Kristiansen R, Dueholm MS, Bank S, Nielsen PH, Karst SM, Cattoir V, Lienhard R, Grisold AJ, Olsen AB, Reinhard M, Søby KM, Christensen JJ, Prag J, Thomsen TR. Kristiansen R, et al. Among authors: karst sm. Genome Announc. 2014 Sep 4;2(5):e00880-14. doi: 10.1128/genomeA.00880-14. Genome Announc. 2014. PMID: 25189588 Free PMC article.
Survival and activity of individual bioaugmentation strains.
Dueholm MS, Marques IG, Karst SM, D'Imperio S, Tale VP, Lewis D, Nielsen PH, Nielsen JL. Dueholm MS, et al. Among authors: karst sm. Bioresour Technol. 2015 Jun;186:192-199. doi: 10.1016/j.biortech.2015.02.111. Epub 2015 Mar 14. Bioresour Technol. 2015. PMID: 25817029
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark.
Michaelsen TY, Bennedbæk M, Christiansen LE, Jørgensen MSF, Møller CH, Sørensen EA, Knutsson S, Brandt J, Jensen TBN, Chiche-Lapierre C, Collados EF, Sørensen T, Petersen C, Le-Quy V, Sereika M, Hansen FT, Rasmussen M, Fonager J, Karst SM, Marvig RL, Stegger M, Sieber RN, Skov R, Legarth R, Krause TG, Fomsgaard A; Danish COVID-19 Genome Consortium (DCGC); Albertsen M. Michaelsen TY, et al. Among authors: karst sm. Genome Med. 2022 May 4;14(1):47. doi: 10.1186/s13073-022-01045-7. Genome Med. 2022. PMID: 35505393 Free PMC article.
MiDAS: the field guide to the microbes of activated sludge.
McIlroy SJ, Saunders AM, Albertsen M, Nierychlo M, McIlroy B, Hansen AA, Karst SM, Nielsen JL, Nielsen PH. McIlroy SJ, et al. Among authors: karst sm. Database (Oxford). 2015 Jun 27;2015:bav062. doi: 10.1093/database/bav062. Print 2015. Database (Oxford). 2015. PMID: 26120139 Free PMC article.
84 results