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Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity.
Shaffer JP, Nothias LF, Thompson LR, Sanders JG, Salido RA, Couvillion SP, Brejnrod AD, Lejzerowicz F, Haiminen N, Huang S, Lutz HL, Zhu Q, Martino C, Morton JT, Karthikeyan S, Nothias-Esposito M, Dührkop K, Böcker S, Kim HW, Aksenov AA, Bittremieux W, Minich JJ, Marotz C, Bryant MM, Sanders K, Schwartz T, Humphrey G, Vásquez-Baeza Y, Tripathi A, Parida L, Carrieri AP, Beck KL, Das P, González A, McDonald D, Ladau J, Karst SM, Albertsen M, Ackermann G, DeReus J, Thomas T, Petras D, Shade A, Stegen J, Song SJ, Metz TO, Swafford AD, Dorrestein PC, Jansson JK, Gilbert JA, Knight R; Earth Microbiome Project 500 (EMP500) Consortium. Shaffer JP, et al. Among authors: bocker s. Nat Microbiol. 2022 Dec;7(12):2128-2150. doi: 10.1038/s41564-022-01266-x. Epub 2022 Nov 28. Nat Microbiol. 2022. PMID: 36443458 Free PMC article.
High-throughput MALDI-TOF discovery of genomic sequence polymorphisms.
Stanssens P, Zabeau M, Meersseman G, Remes G, Gansemans Y, Storm N, Hartmer R, Honisch C, Rodi CP, Böcker S, van den Boom D. Stanssens P, et al. Among authors: bocker s. Genome Res. 2004 Jan;14(1):126-33. doi: 10.1101/gr.1692304. Genome Res. 2004. PMID: 14707174 Free PMC article.
Base-specific fragmentation of amplified 16S rRNA genes analyzed by mass spectrometry: a tool for rapid bacterial identification.
von Wintzingerode F, Böcker S, Schlötelburg C, Chiu NH, Storm N, Jurinke C, Cantor CR, Göbel UB, van den Boom D. von Wintzingerode F, et al. Among authors: bocker s. Proc Natl Acad Sci U S A. 2002 May 14;99(10):7039-44. doi: 10.1073/pnas.102165899. Epub 2002 Apr 30. Proc Natl Acad Sci U S A. 2002. PMID: 11983869 Free PMC article.
SAMPI: protein identification with mass spectra alignments.
Kaltenbach HM, Wilke A, Böcker S. Kaltenbach HM, et al. Among authors: bocker s. BMC Bioinformatics. 2007 Mar 26;8:102. doi: 10.1186/1471-2105-8-102. BMC Bioinformatics. 2007. PMID: 17386090 Free PMC article.
Exact and heuristic algorithms for weighted cluster editing.
Rahmann S, Wittkop T, Baumbach J, Martin M, Truss A, Böcker S. Rahmann S, et al. Among authors: bocker s. Comput Syst Bioinformatics Conf. 2007;6:391-401. Comput Syst Bioinformatics Conf. 2007. PMID: 17951842 Free article.
99 results