Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

17 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
Putting AlphaFold models to work with phenix.process_predicted_model and ISOLDE.
Oeffner RD, Croll TI, Millán C, Poon BK, Schlicksup CJ, Read RJ, Terwilliger TC. Oeffner RD, et al. Acta Crystallogr D Struct Biol. 2022 Nov 1;78(Pt 11):1303-1314. doi: 10.1107/S2059798322010026. Epub 2022 Oct 27. Acta Crystallogr D Struct Biol. 2022. PMID: 36322415 Free PMC article.
PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Adams PD, Afonine PV, Bunkóczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral GJ, Grosse-Kunstleve RW, McCoy AJ, Moriarty NW, Oeffner R, Read RJ, Richardson DC, Richardson JS, Terwilliger TC, Zwart PH. Adams PD, et al. Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. doi: 10.1107/S0907444909052925. Epub 2010 Jan 22. Acta Crystallogr D Biol Crystallogr. 2010. PMID: 20124702 Free PMC article.
The Phenix software for automated determination of macromolecular structures.
Adams PD, Afonine PV, Bunkóczi G, Chen VB, Echols N, Headd JJ, Hung LW, Jain S, Kapral GJ, Grosse Kunstleve RW, McCoy AJ, Moriarty NW, Oeffner RD, Read RJ, Richardson DC, Richardson JS, Terwilliger TC, Zwart PH. Adams PD, et al. Among authors: oeffner rd. Methods. 2011 Sep;55(1):94-106. doi: 10.1016/j.ymeth.2011.07.005. Epub 2011 Jul 29. Methods. 2011. PMID: 21821126 Free PMC article.
Improved estimates of coordinate error for molecular replacement.
Oeffner RD, Bunkóczi G, McCoy AJ, Read RJ. Oeffner RD, et al. Acta Crystallogr D Biol Crystallogr. 2013 Nov;69(Pt 11):2209-15. doi: 10.1107/S0907444913023512. Epub 2013 Oct 12. Acta Crystallogr D Biol Crystallogr. 2013. PMID: 24189232 Free PMC article. Clinical Trial.
Phaser.MRage: automated molecular replacement.
Bunkóczi G, Echols N, McCoy AJ, Oeffner RD, Adams PD, Read RJ. Bunkóczi G, et al. Among authors: oeffner rd. Acta Crystallogr D Biol Crystallogr. 2013 Nov;69(Pt 11):2276-86. doi: 10.1107/S0907444913022750. Epub 2013 Oct 18. Acta Crystallogr D Biol Crystallogr. 2013. PMID: 24189240 Free PMC article. Review.
Automating crystallographic structure solution and refinement of protein-ligand complexes.
Echols N, Moriarty NW, Klei HE, Afonine PV, Bunkóczi G, Headd JJ, McCoy AJ, Oeffner RD, Read RJ, Terwilliger TC, Adams PD. Echols N, et al. Among authors: oeffner rd. Acta Crystallogr D Biol Crystallogr. 2014 Jan;70(Pt 1):144-54. doi: 10.1107/S139900471302748X. Epub 2013 Dec 25. Acta Crystallogr D Biol Crystallogr. 2014. PMID: 24419387 Free PMC article.
Ab initio solution of macromolecular crystal structures without direct methods.
McCoy AJ, Oeffner RD, Wrobel AG, Ojala JR, Tryggvason K, Lohkamp B, Read RJ. McCoy AJ, et al. Among authors: oeffner rd. Proc Natl Acad Sci U S A. 2017 Apr 4;114(14):3637-3641. doi: 10.1073/pnas.1701640114. Epub 2017 Mar 21. Proc Natl Acad Sci U S A. 2017. PMID: 28325875 Free PMC article.
Exploiting distant homologues for phasing through the generation of compact fragments, local fold refinement and partial solution combination.
Millán C, Sammito MD, McCoy AJ, Nascimento AFZ, Petrillo G, Oeffner RD, Domínguez-Gil T, Hermoso JA, Read RJ, Usón I. Millán C, et al. Among authors: oeffner rd. Acta Crystallogr D Struct Biol. 2018 Apr 1;74(Pt 4):290-304. doi: 10.1107/S2059798318001365. Epub 2018 Apr 3. Acta Crystallogr D Struct Biol. 2018. PMID: 29652256 Free PMC article.
17 results