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Finding candidate genes under positive selection in Non-model species: examples of genes involved in host specialization in pathogens.
Aguileta G, Lengelle J, Marthey S, Chiapello H, Rodolphe F, Gendrault A, Yockteng R, Vercken E, Devier B, Fontaine MC, Wincker P, Dossat C, Cruaud C, Couloux A, Giraud T. Aguileta G, et al. Among authors: chiapello h. Mol Ecol. 2010 Jan;19(2):292-306. doi: 10.1111/j.1365-294X.2009.04454.x. Epub 2009 Dec 8. Mol Ecol. 2010. PMID: 20041992
CompaGB: An open framework for genome browsers comparison.
Lacroix T, Loux V, Gendrault A, Gibrat JF, Chiapello H. Lacroix T, et al. Among authors: chiapello h. BMC Res Notes. 2011 May 4;4:133. doi: 10.1186/1756-0500-4-133. BMC Res Notes. 2011. PMID: 21542900 Free PMC article.
Intracellular Salmonella Paratyphi A is motile and differs in the expression of flagella-chemotaxis, SPI-1 and carbon utilization pathways in comparison to intracellular S. Typhimurium.
Cohen H, Hoede C, Scharte F, Coluzzi C, Cohen E, Shomer I, Mallet L, Holbert S, Serre RF, Schiex T, Virlogeux-Payant I, Grassl GA, Hensel M, Chiapello H, Gal-Mor O. Cohen H, et al. Among authors: chiapello h. PLoS Pathog. 2022 Apr 5;18(4):e1010425. doi: 10.1371/journal.ppat.1010425. eCollection 2022 Apr. PLoS Pathog. 2022. PMID: 35381053 Free PMC article.
Comparative Genome Analysis of Enterococcus cecorum Reveals Intercontinental Spread of a Lineage of Clinical Poultry Isolates.
Laurentie J, Loux V, Hennequet-Antier C, Chambellon E, Deschamps J, Trotereau A, Furlan S, Darrigo C, Kempf F, Lao J, Milhes M, Roques C, Quinquis B, Vandecasteele C, Boyer R, Bouchez O, Repoila F, Le Guennec J, Chiapello H, Briandet R, Helloin E, Schouler C, Kempf I, Serror P. Laurentie J, et al. Among authors: chiapello h. mSphere. 2023 Apr 20;8(2):e0049522. doi: 10.1128/msphere.00495-22. Epub 2023 Feb 16. mSphere. 2023. PMID: 36794931 Free PMC article.
YOC, A new strategy for pairwise alignment of collinear genomes.
Uricaru R, Michotey C, Chiapello H, Rivals E. Uricaru R, et al. Among authors: chiapello h. BMC Bioinformatics. 2015 Apr 2;16(1):111. doi: 10.1186/s12859-015-0530-3. BMC Bioinformatics. 2015. PMID: 25885358 Free PMC article.
47 results