Rajput A - Search Results

1

Advanced transcriptomic analysis reveals the role of efflux pumps and media composition in antibiotic responses of Pseudomonas aeruginosa.

Rajput A, Tsunemoto H, Sastry AV, Szubin R, Rychel K, Chauhan SM, Pogliano J, Palsson BO. Rajput A, et al. Nucleic Acids Res. 2022 Sep 23;50(17):9675-9688. doi: 10.1093/nar/gkac743. Nucleic Acids Res. 2022. PMID: 36095122 Free PMC article.

2

Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media.

Rajput A, Poudel S, Tsunemoto H, Meehan M, Szubin R, Olson CA, Lamsa A, Seif Y, Dillon N, Vrbanac A, Sugie J, Dahesh S, Monk JM, Dorrestein PC, Knight R, Nizet V, Palsson BO, Feist AM, Pogliano J. Rajput A, et al. Sci Data. 2019 Dec 17;6(1):322. doi: 10.1038/s41597-019-0331-z. Sci Data. 2019. PMID: 31848353 Free PMC article.

3

Identifying the effect of vancomycin on health care-associated methicillin-resistant Staphylococcus aureus strains using bacteriological and physiological media.

Rajput A, Poudel S, Tsunemoto H, Meehan M, Szubin R, Olson CA, Seif Y, Lamsa A, Dillon N, Vrbanac A, Sugie J, Dahesh S, Monk JM, Dorrestein PC, Knight R, Pogliano J, Nizet V, Feist AM, Palsson BO. Rajput A, et al. Gigascience. 2021 Jan 9;10(1):giaa156. doi: 10.1093/gigascience/giaa156. Gigascience. 2021. PMID: 33420779 Free PMC article.

4

Pangenome Analytics Reveal Two-Component Systems as Conserved Targets in ESKAPEE Pathogens.

Rajput A, Seif Y, Choudhary KS, Dalldorf C, Poudel S, Monk JM, Palsson BO. Rajput A, et al. mSystems. 2021 Jan 26;6(1):e00981-20. doi: 10.1128/mSystems.00981-20. mSystems. 2021. PMID: 33500331 Free PMC article.

5

Machine learning from Pseudomonas aeruginosa transcriptomes identifies independently modulated sets of genes associated with known transcriptional regulators.

Rajput A, Tsunemoto H, Sastry AV, Szubin R, Rychel K, Sugie J, Pogliano J, Palsson BO. Rajput A, et al. Nucleic Acids Res. 2022 Apr 22;50(7):3658-3672. doi: 10.1093/nar/gkac187. Nucleic Acids Res. 2022. PMID: 35357493 Free PMC article.

6

aBiofilm: a resource of anti-biofilm agents and their potential implications in targeting antibiotic drug resistance.

Rajput A, Thakur A, Sharma S, Kumar M. Rajput A, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D894-D900. doi: 10.1093/nar/gkx1157. Nucleic Acids Res. 2018. PMID: 29156005 Free PMC article.

7

Biofilm-i: A Platform for Predicting Biofilm Inhibitors Using Quantitative Structure-Relationship (QSAR) Based Regression Models to Curb Antibiotic Resistance.

Rajput A, Bhamare KT, Thakur A, Kumar M. Rajput A, et al. Molecules. 2022 Jul 29;27(15):4861. doi: 10.3390/molecules27154861. Molecules. 2022. PMID: 35956807 Free PMC article.

8

Prediction and analysis of quorum sensing peptides based on sequence features.

Rajput A, Gupta AK, Kumar M. Rajput A, et al. PLoS One. 2015 Mar 17;10(3):e0120066. doi: 10.1371/journal.pone.0120066. eCollection 2015. PLoS One. 2015. PMID: 25781990 Free PMC article.

9

SigMol: repertoire of quorum sensing signaling molecules in prokaryotes.

Rajput A, Kaur K, Kumar M. Rajput A, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D634-9. doi: 10.1093/nar/gkv1076. Epub 2015 Oct 20. Nucleic Acids Res. 2016. PMID: 26490957 Free PMC article.

10

MSLVP: prediction of multiple subcellular localization of viral proteins using a support vector machine.

Thakur A, Rajput A, Kumar M. Thakur A, et al. Among authors: rajput a. Mol Biosyst. 2016 Jul 19;12(8):2572-86. doi: 10.1039/c6mb00241b. Mol Biosyst. 2016. PMID: 27272007

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