Nordlund P - Search Results

1

CycleDNN - A Novel Deep Neural Network Model for CETSA Feature Prediction cross Cell Lines.

Zeng Z, Zhao S, Da Q, Qian P, Leong TW, Dai L, Nordlund P, Prabhu N, Zhao Z, Yang X. Zeng Z, et al. Among authors: nordlund p. Annu Int Conf IEEE Eng Med Biol Soc. 2022 Jul;2022:1647-1650. doi: 10.1109/EMBC48229.2022.9871875. Annu Int Conf IEEE Eng Med Biol Soc. 2022. PMID: 36085941

2

CETSA Feature Based Clustering for Protein Outlier Discovery by Protein-to-Protein Interaction Prediction.

Yang X, Da Q, Qian P, Veeravalli B, Leong TW, Dai L, Nordlund P, Prabhu N, Zhao Z, Zeng Z. Yang X, et al. Among authors: nordlund p. Annu Int Conf IEEE Eng Med Biol Soc. 2022 Jul;2022:1659-1662. doi: 10.1109/EMBC48229.2022.9871558. Annu Int Conf IEEE Eng Med Biol Soc. 2022. PMID: 36085889

3

CETSA in integrated proteomics studies of cellular processes.

Prabhu N, Dai L, Nordlund P. Prabhu N, et al. Among authors: nordlund p. Curr Opin Chem Biol. 2020 Feb;54:54-62. doi: 10.1016/j.cbpa.2019.11.004. Epub 2019 Dec 12. Curr Opin Chem Biol. 2020. PMID: 31838273 Review.

4

Horizontal Cell Biology: Monitoring Global Changes of Protein Interaction States with the Proteome-Wide Cellular Thermal Shift Assay (CETSA).

Dai L, Prabhu N, Yu LY, Bacanu S, Ramos AD, Nordlund P. Dai L, et al. Among authors: nordlund p. Annu Rev Biochem. 2019 Jun 20;88:383-408. doi: 10.1146/annurev-biochem-062917-012837. Epub 2019 Apr 2. Annu Rev Biochem. 2019. PMID: 30939043 Review.

5

Monitoring structural modulation of redox-sensitive proteins in cells with MS-CETSA.

Sun W, Dai L, Yu H, Puspita B, Zhao T, Li F, Tan JL, Lim YT, Chen MW, Sobota RM, Tenen DG, Prabhu N, Nordlund P. Sun W, et al. Among authors: nordlund p. Redox Biol. 2019 Jun;24:101168. doi: 10.1016/j.redox.2019.101168. Epub 2019 Mar 14. Redox Biol. 2019. PMID: 30925293 Free PMC article.

6

Cellular thermal shift assay for the identification of drug-target interactions in the Plasmodium falciparum proteome.

Dziekan JM, Wirjanata G, Dai L, Go KD, Yu H, Lim YT, Chen L, Wang LC, Puspita B, Prabhu N, Sobota RM, Nordlund P, Bozdech Z. Dziekan JM, et al. Among authors: nordlund p. Nat Protoc. 2020 Jun;15(6):1881-1921. doi: 10.1038/s41596-020-0310-z. Epub 2020 Apr 27. Nat Protoc. 2020. PMID: 32341577

7

CETSA interaction proteomics define specific RNA-modification pathways as key components of fluorouracil-based cancer drug cytotoxicity.

Liang YY, Bacanu S, Sreekumar L, Ramos AD, Dai L, Michaelis M, Cinatl J, Seki T, Cao Y, Coffill CR, Lane DP, Prabhu N, Nordlund P. Liang YY, et al. Among authors: nordlund p. Cell Chem Biol. 2022 Apr 21;29(4):572-585.e8. doi: 10.1016/j.chembiol.2021.06.007. Epub 2021 Jul 16. Cell Chem Biol. 2022. PMID: 34265272 Free article.

8

Modulation of Protein-Interaction States through the Cell Cycle.

Dai L, Zhao T, Bisteau X, Sun W, Prabhu N, Lim YT, Sobota RM, Kaldis P, Nordlund P. Dai L, et al. Among authors: nordlund p. Cell. 2018 May 31;173(6):1481-1494.e13. doi: 10.1016/j.cell.2018.03.065. Epub 2018 Apr 26. Cell. 2018. PMID: 29706543 Free article.

9

Identifying purine nucleoside phosphorylase as the target of quinine using cellular thermal shift assay.

Dziekan JM, Yu H, Chen D, Dai L, Wirjanata G, Larsson A, Prabhu N, Sobota RM, Bozdech Z, Nordlund P. Dziekan JM, et al. Among authors: nordlund p. Sci Transl Med. 2019 Jan 2;11(473):eaau3174. doi: 10.1126/scitranslmed.aau3174. Sci Transl Med. 2019. PMID: 30602534

10

An efficient proteome-wide strategy for discovery and characterization of cellular nucleotide-protein interactions.

Lim YT, Prabhu N, Dai L, Go KD, Chen D, Sreekumar L, Egeblad L, Eriksson S, Chen L, Veerappan S, Teo HL, Tan CSH, Lengqvist J, Larsson A, Sobota RM, Nordlund P. Lim YT, et al. Among authors: nordlund p. PLoS One. 2018 Dec 6;13(12):e0208273. doi: 10.1371/journal.pone.0208273. eCollection 2018. PLoS One. 2018. PMID: 30521565 Free PMC article.

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