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Genomic surveillance of SARS-CoV-2 Omicron variants on a university campus.
Nat Commun. 2022 Sep 6;13(1):5240. doi: 10.1038/s41467-022-32786-z.
Nat Commun. 2022.
PMID: 36068236
Free PMC article.
Early underdetected dissemination across countries followed by extensive local transmission propelled the 2022 mpox epidemic.
Paredes MI, Ahmed N, Figgins M, Colizza V, Lemey P, McCrone JT, Müller N, Tran-Kiem C, Bedford T.
Paredes MI, et al.
medRxiv [Preprint]. 2023 Dec 7:2023.07.27.23293266. doi: 10.1101/2023.07.27.23293266.
medRxiv. 2023.
PMID: 37577709
Free PMC article.
Updated.
Preprint.
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Fitness models provide accurate short-term forecasts of SARS-CoV-2 variant frequency.
Abousamra E, Figgins M, Bedford T.
Abousamra E, et al.
medRxiv [Preprint]. 2024 Jan 22:2023.11.30.23299240. doi: 10.1101/2023.11.30.23299240.
medRxiv. 2024.
PMID: 38076866
Free PMC article.
Preprint.
Item in Clipboard
Underdetected dispersal and extensive local transmission drove the 2022 mpox epidemic.
Paredes MI, Ahmed N, Figgins M, Colizza V, Lemey P, McCrone JT, Müller N, Tran-Kiem C, Bedford T.
Paredes MI, et al.
Cell. 2024 Mar 14;187(6):1374-1386.e13. doi: 10.1016/j.cell.2024.02.003. Epub 2024 Feb 29.
Cell. 2024.
PMID: 38428425
Free article.
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Positive selection underlies repeated knockout of ORF8 in SARS-CoV-2 evolution.
Wagner C, Kistler KE, Perchetti GA, Baker N, Frisbie LA, Torres LM, Aragona F, Yun C, Figgins M, Greninger AL, Cox A, Oltean HN, Roychoudhury P, Bedford T.
Wagner C, et al.
Nat Commun. 2024 Apr 13;15(1):3207. doi: 10.1038/s41467-024-47599-5.
Nat Commun. 2024.
PMID: 38615031
Free PMC article.
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