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I2b2-etl: Python application for importing electronic health data into the informatics for integrating biology and the bedside platform.
Wagholikar KB, Ainsworth L, Zelle D, Chaney K, Mendis M, Klann J, Blood AJ, Miller A, Chulyadyo R, Oates M, Gordon WJ, Aronson SJ, Scirica BM, Murphy SN. Wagholikar KB, et al. Among authors: mendis m. Bioinformatics. 2022 Oct 14;38(20):4833-4836. doi: 10.1093/bioinformatics/btac595. Bioinformatics. 2022. PMID: 36053173 Free PMC article.
Extending i2b2 into a framework for semantic abstraction of EHR to facilitate rapid development and portability of Health IT applications.
Wagholikar KB, Ainsworth L, Vernekar VP, Pathak A, Glynn C, Zelle D, Zagade A, Karipineni N, Herrick CD, McPartlin M, Bui TV, Mendis M, Klann J, Oates M, Gordon W, Cannon C, Patel R, Aronson SJ, MacRae CA, Scirica BM, Murphy SN. Wagholikar KB, et al. Among authors: mendis m. AMIA Jt Summits Transl Sci Proc. 2019 May 6;2019:370-378. eCollection 2019. AMIA Jt Summits Transl Sci Proc. 2019. PMID: 31258990 Free PMC article.
Strategies for maintaining patient privacy in i2b2.
Murphy SN, Gainer V, Mendis M, Churchill S, Kohane I. Murphy SN, et al. Among authors: mendis m. J Am Med Inform Assoc. 2011 Dec;18 Suppl 1(Suppl 1):i103-8. doi: 10.1136/amiajnl-2011-000316. Epub 2011 Oct 7. J Am Med Inform Assoc. 2011. PMID: 21984588 Free PMC article.
Apps to display patient data, making SMART available in the i2b2 platform.
Wattanasin N, Porter A, Ubaha S, Mendis M, Phillips L, Mandel J, Ramoni R, Mandl K, Kohane I, Murphy SN. Wattanasin N, et al. Among authors: mendis m. AMIA Annu Symp Proc. 2012;2012:960-9. Epub 2012 Nov 3. AMIA Annu Symp Proc. 2012. PMID: 23304371 Free PMC article.
SMART-on-FHIR implemented over i2b2.
Wagholikar KB, Mandel JC, Klann JG, Wattanasin N, Mendis M, Chute CG, Mandl KD, Murphy SN. Wagholikar KB, et al. Among authors: mendis m. J Am Med Inform Assoc. 2017 Mar 1;24(2):398-402. doi: 10.1093/jamia/ocw079. J Am Med Inform Assoc. 2017. PMID: 27274012 Free PMC article.
Automating Installation of the Integrating Biology and the Bedside (i2b2) Platform.
Wagholikar KB, Mendis M, Dessai P, Sanz J, Law S, Gilson M, Sanders S, Vangala M, Bell DS, Murphy SN. Wagholikar KB, et al. Among authors: mendis m. Biomed Inform Insights. 2018 Jun 4;10:1178222618777749. doi: 10.1177/1178222618777749. eCollection 2018. Biomed Inform Insights. 2018. PMID: 29887730 Free PMC article. Review.
Integrating outside modules into the i2b2 architecture.
Mendis M, Phillips LC, Kuttan R, Pan W, Gainer V, Kohane I, Murphy SN. Mendis M, et al. AMIA Annu Symp Proc. 2008 Nov 6:1054. AMIA Annu Symp Proc. 2008. PMID: 18999021 No abstract available.
70 results